Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00154 ATGGCATCTTCAGATGAAGAGGGTGAGATTTTTCCAGATTCTGTTGATAGTTATTGGTTTGAGAATGATAAGGCGCAGTTTGTGTCATTTTTAAATTTGACATTATTGTGGAGCGTTGATGAGGTCGAGTGTTTCTCAGAAACAAAAGTGTTTTTACGTGGCACCACTGATAATGGCCTCCAGAAAATTCACAAACAAATTATAGGATGGAGATTTGATCTTTCATGTGAGCAGCCTATGATTTCAGTGCTTTTGAAGCAGAAATACTGGATAACACTTCTAAAACCGAGAAAATGCTTTGAAAATACTATTAGGTCAGTCTTGGTCACAGTTTATTGGTTACATTGTGTGAAATGGGATCCGGAGGAATCAAGAGTGTCTATTTTGGTCAAACTTCTGAAGGAATTTAGCTCATTCAATATTCCACCATCTGAGAATGATGTTCGAAGTCATATAACATTGATTCATGAGGCTATAGAAAGGGACGCTGATTTTACAAAATCAAAGTATCTGCTTAATTTCATAGGAAAGACATGTTCAAATGAAGACTTCCATGATGAGGATGTTCGCACTACAAAGAAAAAAAAATTTATAGTTGAATCAGAGGAGGAGGACGAGGAGGAGGACGAGAAGGAAGAGGAGAAGGAAGAGGTGGTGGAAGAGGATGAGAAGGAGGAGGAGGAGGAGGTGGTGGAAGAGGATGAGAAGGAGGAGGAGGAGGTGGTGGAGGAGGAGGAGAATGATAAATCTGACGGTGAAGGCGAACTCAATGTAGATGAAGATCAAAATATTGGATATGATACTGTTTGTGCAATTTGTGATAATGGCGGTGAAATACTTCCTTGTGAAGGAAGATGTCTGAGATCCTTCCATGCAACCATAGAGGCTGGCAGAGATTCATTTTGTGATTCTCTTGGCTACACTATTACTCAAGTTAATGCTTTTCCAAACTTCTATTGTGAAAATTGTAAACATAAGAAGCATCAATGCTTTGCATGTGGCAAACTGGGTTCATCTGATGAATCGTCTAACCCTGAGGTATTTCCTTGTGTTACTGCAAATTGTGGTCACTATTACCATCCTGAATGTGTTGCAAGACTACTGTACCCTGGCACTGACCCCAAACAAGAGGCAATGAGGAAGAACATTGCAACCGAAAAAACATTTGTCTGTCCTCTTCATATATGTTTGTTATGCAGAAAAGGTGAAAATAGAAATGTTCATGATTTGCAATTTGCGATGTGTAGACGCTGCCCCAAGGCTTACCACCGGAAATGCTTGCCCAAGGAAATTTCCTTCACATTTGATTATTATATGGGCATTGAGCAGAGGGCTTGGGATGATCTTCTGGACAAAAGAATTTTGATGTATTGCTTGGATCATAAGATAGTTTTGGAACTCGGAACTCCTGCAAGAAACCATCTGATATTTCCTGATAAGGAAGTGAAAAGGAAGTTAGTCAGTTTAAAATTATTAAACAAAGAGAAGGTTGCTATACCATCGAAGAGAAGTTTTGAAGATCTTTCTCCTGACAAGACATTGGTGCCAAAACTAATTTTAAAGGATAGAGTTGGACTTCAAAGTGGCGGTTCTTCAAAAGTTATGGAGAAAATATGCTCTAAGCAAGATACACATTTGTCAACTGGACCAGATAATTTTGACAGGGCTAGAAAATATTTGAAAGTTGAAACAGCATCTGCGTCAAATAGGTCATTACCAAATTATGAAAACAGAGTGCCTTTGAAAAATAATAACTTGTCCTGTATTCCAAGGCAGCCTGAAGCTAGATCCCAACAGCAAAAATCTGTTGGTAGAATTGAAGAAACAAGCTTAAAAAAGCCTCTGGTAAAAAAAGTCAAAACTTCACTTGAGCATAGAAAAGCAGAATTGGAAAACCGAATTTTGTCTTTAATGGAAGAAGCCACGTCTAATTTGAACATGGAAGAATTTGAAAAGGACCATCAAGTCTTTTCAAGTTTCACACAAACTGCATTTCATAAGAACGTAACTCTAGGAAAAGTTGAAGGTTCTGTTAAGGCTATTAAAATAGCTTTGCAGAAGTTAAATGAAGGATGTAGTATTGAGGAAGCAAAAGCTATTTGTGGGCCAGAAATTGTTCGTCAGCTTTTTACTTGGAAGAAGCAGCTCAAGATCTATCTTGCACCTTTTTTTCATGGCATGCGATATACTTCATTTGGTCGCCATTTCACTAAAGTAGACAAATTGAAAGAGATTGTTGAAAGGCTTCATTGGTATGTGCAAAGTGGTGACACGATTTTGGACTTCTGTTGTGGCGCAAATGACTTCAGCTGTCTAATGAAATCAAAGCTTGACCAGACTGGAAAGTTCTGTTCATTTAAGAACTATGATTTAATCCAAGCTAAGAACGATTTCAACTTCGAAAAGAGAGATTGGATGAGTGTCCAGCCTGAGGAATTACCCAATGGTTCTCAACTTATCATAGGGCTGAATCCTCCTTTTGGTGTCAACGGCTCTCTTGCTAACAAATTTATTAACAAGGCATTGACGTTTAAGCCAAAACTCCTTATACTTATTGTGCCAAAAGTAACAAAAAGACTTGACAGAAAGAAAGGTGGTGGATATGATTTAATTTGGGAAGATGAGGAAATATGTTCAGGAAAGTCATTTTATCTACCTGGCTCTGTCGATACTCAACATAAGCAATTGGAAGACTGGAACCTGAAGGCGCCGCCTCTTTACCTTTGGAGTCGCCCTGATTGGACTGCTTGGCACATGGGAATTGCTCAATATCATCGCCACATCAAATATGGCGTGTCTAATAACAATAATAGAGGAAAAGAAGTGATGAATTATCTTATGGAGGAGAATCATGACTGTTATCAGAATTACCCTGGGTTACATGCACCTGATAATTTCTTAAGCATATTTGATGGTGTTCCAGATGATAATGGTGACATTGTACTGCAGGCTGGTGCACCTAGCTTTGCTTTATGA 2976 0.3858 MASSDEEGEIFPDSVDSYWFENDKAQFVSFLNLTLLWSVDEVECFSETKVFLRGTTDNGLQKIHKQIIGWRFDLSCEQPMISVLLKQKYWITLLKPRKCFENTIRSVLVTVYWLHCVKWDPEESRVSILVKLLKEFSSFNIPPSENDVRSHITLIHEAIERDADFTKSKYLLNFIGKTCSNEDFHDEDVRTTKKKKFIVESEEEDEEEDEKEEEKEEVVEEDEKEEEEEVVEEDEKEEEEVVEEEENDKSDGEGELNVDEDQNIGYDTVCAICDNGGEILPCEGRCLRSFHATIEAGRDSFCDSLGYTITQVNAFPNFYCENCKHKKHQCFACGKLGSSDESSNPEVFPCVTANCGHYYHPECVARLLYPGTDPKQEAMRKNIATEKTFVCPLHICLLCRKGENRNVHDLQFAMCRRCPKAYHRKCLPKEISFTFDYYMGIEQRAWDDLLDKRILMYCLDHKIVLELGTPARNHLIFPDKEVKRKLVSLKLLNKEKVAIPSKRSFEDLSPDKTLVPKLILKDRVGLQSGGSSKVMEKICSKQDTHLSTGPDNFDRARKYLKVETASASNRSLPNYENRVPLKNNNLSCIPRQPEARSQQQKSVGRIEETSLKKPLVKKVKTSLEHRKAELENRILSLMEEATSNLNMEEFEKDHQVFSSFTQTAFHKNVTLGKVEGSVKAIKIALQKLNEGCSIEEAKAICGPEIVRQLFTWKKQLKIYLAPFFHGMRYTSFGRHFTKVDKLKEIVERLHWYVQSGDTILDFCCGANDFSCLMKSKLDQTGKFCSFKNYDLIQAKNDFNFEKRDWMSVQPEELPNGSQLIIGLNPPFGVNGSLANKFINKALTFKPKLLILIVPKVTKRLDRKKGGGYDLIWEDEEICSGKSFYLPGSVDTQHKQLEDWNLKAPPLYLWSRPDWTAWHMGIAQYHRHIKYGVSNNNNRGKEVMNYLMEENHDCYQNYPGLHAPDNFLSIFDGVPDDNGDIVLQAGAPSFAL 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00154 991 Coils Coil 620 640 - -
Trre15g00154 991 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 266 325 IPR013083 -
Trre15g00154 991 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 5 940 - -
Trre15g00154 991 MobiDBLite consensus disorder prediction 202 259 - -
Trre15g00154 991 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 326 429 IPR013083 -
Trre15g00154 991 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 720 835 IPR029063 -
Trre15g00154 991 SMART PHD_3 329 395 IPR001965 -
Trre15g00154 991 SMART PHD_3 396 462 IPR001965 -
Trre15g00154 991 SMART PHD_3 269 324 IPR001965 -
Trre15g00154 991 MobiDBLite consensus disorder prediction 573 605 - -
Trre15g00154 991 Coils Coil 201 248 - -
Trre15g00154 991 MobiDBLite consensus disorder prediction 198 259 - -
Trre15g00154 991 CDD PHD2_NSD 329 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00154 Trre-Chr15 1047612 1055187 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00154 - - cam:101512524 1556.58