Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00151 ATGGCTTCTAACTATTCTTTCTCTTCTTCTTCAATTCCTTCTCCAAAATCTAGCATGTTTTATTATGGTGGAAGTGAAGATTTCTATGATAAACCTCACTTCCTCCAAGCTTGTTCTCTTTGTAGAAAACATATTGGCCTTAACAAAGACATCTTTATGTACAGAGGGAATACACCATTTTGTAGCCAAGAGTGTAGGCAAGAACAGATAGAGATTGATGAGTGCAAAGAGAAAAGCTGGAAAATTCCATCAAAAAGAAGTGTTAGAAATTCAGAAACCAATCAAAATTCTACAAATAATAAGGCTGTTAGATCAGAATCAGTTGCAGTGGCCTAA 336 0.3512 MASNYSFSSSSIPSPKSSMFYYGGSEDFYDKPHFLQACSLCRKHIGLNKDIFMYRGNTPFCSQECRQEQIEIDECKEKSWKIPSKRSVRNSETNQNSTNNKAVRSESVAVA 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00151 111 ProSiteProfiles Zinc finger FLZ-type profile. 33 77 IPR007650 -
Trre15g00151 111 Pfam zinc-finger of the FCS-type, C2-C2 28 75 IPR007650 -
Trre15g00151 111 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 20 111 IPR044533 -
Trre15g00151 111 MobiDBLite consensus disorder prediction 84 111 - -
Trre15g00151 111 MobiDBLite consensus disorder prediction 86 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00151 Trre-Chr15 1025564 1026223 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00151 - - psat:127076678 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00151 15 1025564 1026223 Trre15g00151 15 1025564 1026223 ECH