Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00122 ATGGCAGAACTAGAAACTCCAATGATGCCAAAATTGATAACTTTTCTCTCTTCATTTCTTGAAAAGGTTGCTGAATTAAATGATGAGACACAACACAAACAAAAGATCTCTGTTTTTCATGGTGTAACAAGACCAAGCATCTCAATTCAAAGCTATCTTGAAAGAATTTTCAAGTATGCAAATTGTAGTTCATCTTGCATCATTGTTGCTTATATTTACCTTGATCGTTTCACTCAATTACAACCTTCTTTGCCTATCAATTCCTTCAATGTTCATCGCTTGTTGATTACTAGTGTCATGGTTGCTGCTAAATTCATGGATGATGTATGCTACAACAATGCTTACTATGCAAAAGTTGGAGGAATTCCCAAAACAGAAATGAATGTTCTTGAATTGGATTTTCTATTTGGTGTGGGTTTCAATTTAAATGTAACACCAGTCACATTCCAAGCCTATTGCGTTCATCTCCAAACACAAATGCTACAAATGCAACCATTGAATTTTGTTGATTCTACACTAAGTTTAGCAAAATCATTTAAGACACATTTATGCTTCAATGAAGATGAATCTTCTCATCAAAACCAACAACAGCTAGCTGTTTGA 603 0.34 MAELETPMMPKLITFLSSFLEKVAELNDETQHKQKISVFHGVTRPSISIQSYLERIFKYANCSSSCIIVAYIYLDRFTQLQPSLPINSFNVHRLLITSVMVAAKFMDDVCYNNAYYAKVGGIPKTEMNVLELDFLFGVGFNLNVTPVTFQAYCVHLQTQMLQMQPLNFVDSTLSLAKSFKTHLCFNEDESSHQNQQQLAV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00122 200 PIRSF PREG 2 200 IPR012389 -
Trre15g00122 200 SUPERFAMILY Cyclin-like 51 143 IPR036915 -
Trre15g00122 200 CDD CYCLIN_AtCycU-like 35 160 - -
Trre15g00122 200 PANTHER UNCHARACTERIZED 9 187 IPR013922 GO:0000079|GO:0019901
Trre15g00122 200 Pfam Cyclin 28 142 IPR013922 GO:0000079|GO:0019901
Trre15g00122 200 Gene3D - 2 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00122 Trre-Chr15 852556 854227 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00122 - - gmx:100794854 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00122 15 852556 854227 Trre15g00122 15 852556 854227 ECH