Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00120 ATGGCTTCTTCCAATGAGAAATCAGCGACATTTTTGAAGAATTACGGTTACGATTTCTTATTGGGATCAATTGCTGCTTTCTATATACTCACGGTTCCTTACACTAAGGTCGAAGAAAGTTTCAATGTTCAAGCAATGCACGATATTCTTTATCATCGCTTTCACTTAGATAATTATGATCATCTAGAATTCCCTGGTGTTGTTCCTCGCACTTTCATTGGTGCTTTGCTTGTGTCACTTGTTGCATCTCCGATTGTATTTATTACAAGTTTGCTGCATTTGCCGAAGTTTTATGCTCTTCTCATAGTTCGAATGGCCCTTGGATGCATCGTACTGTATACACTAAGATTCTTTCGTCATCAGATAAGGAATAAATTTGGGCATCAGGTAGAAGCCTTCTTTGTGATACTAACTTCCATTCAGTTTCATTTTCTGTTCTATTGTTCTCGTCCGCTTCCCAACATTCTTGCTTTGGGTATAGTGAATTTGGCATTTGGATATTGGTTCCAGGGGCGCTTTTATGCTGCTCTAAACTCTTTGATTTTTGCTACAACTGTGTTCAGATGTGACATGCTGTTAATTCTTGGTCCCCTTGGCCTACAACTTCTTCTGACAAAACAAATTTCAGTATGGGGTGCTCTAAAACACTGCATTGTGATGGCCTTCTTCTGCGTAGGTATAACCATATTGGTTGACTCAATTATGTGGAAAAGGTTATTGTGGCCTGAATTTGAAGTCTTATGGTTTAACTCTGTACTGAACAAGAGTTCTGAATGGGGAACACATGCTTTCCATTGGTACTTCACATCCGCGCTCCCTCGTTCACTGCTTGCTGCATATCCTCTTTCACTGTTTGGTTTCTTAGTAGACAGAAGAGTACGATCTTTTGCTTTCCCAGCTCTTGCCTTCATTTTGATTTATTCTAAGCTTCCCCACAAGGAGCTTCGTTTTATTCTAAGTTCAATTCCAATATTCAACTTGTCTGCTTCGATTGCATGTAACAGAATTTACAATAATAGGAAAAAGATGATCTGGAACTTGCTTTTCCTCATTATGTTGGGATCACTTCTAATGAGTCTTGGAGTAACCATCACAACTTTTACGGCATCATATTGGAACTATCCTAGTGGTCATGCCTTAAAAAAATTGCATAGGACTGGTTTTCAAAATGATACAAATGGACAATTGGTTCACATTGATACATTTTCTGCAATGAATGGAATATCTCGCTTTTGTGAAAGTGATTTCCCATGGAGGTATTCTAAAGAAGAAGAAATTAGCTTGCAAGACTTTCAGCAGAGAAATTTTACTTTCTTAATAAATGAACATCCTGTGATCAATGGATTCAAGTGTCTGTTTACTGAAGATGGTTTCTCAAGAATGCGTATTAAATATGGCTTTCCACCAATTTTACTGGTTAAAGAGCCTAAAGTGTATGTCCATGGAAATTTAGAAAACAATGCTGTTGTCGACAAAATTTGGCCTGGTTGCCCATAA 1497 0.3794 MASSNEKSATFLKNYGYDFLLGSIAAFYILTVPYTKVEESFNVQAMHDILYHRFHLDNYDHLEFPGVVPRTFIGALLVSLVASPIVFITSLLHLPKFYALLIVRMALGCIVLYTLRFFRHQIRNKFGHQVEAFFVILTSIQFHFLFYCSRPLPNILALGIVNLAFGYWFQGRFYAALNSLIFATTVFRCDMLLILGPLGLQLLLTKQISVWGALKHCIVMAFFCVGITILVDSIMWKRLLWPEFEVLWFNSVLNKSSEWGTHAFHWYFTSALPRSLLAAYPLSLFGFLVDRRVRSFAFPALAFILIYSKLPHKELRFILSSIPIFNLSASIACNRIYNNRKKMIWNLLFLIMLGSLLMSLGVTITTFTASYWNYPSGHALKKLHRTGFQNDTNGQLVHIDTFSAMNGISRFCESDFPWRYSKEEEISLQDFQQRNFTFLINEHPVINGFKCLFTEDGFSRMRIKYGFPPILLVKEPKVYVHGNLENNAVVDKIWPGCP 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00120 498 PANTHER GLYCOSYLTRANSFERASE 17 469 IPR005599 GO:0016757
Trre15g00120 498 Pfam Alg9-like mannosyltransferase family 34 400 IPR005599 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00120 Trre-Chr15 830925 841247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00120 225 324 Glycosyltransferase AT5G14850 34.000 2.95e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00120 K03847 - gmx:100776070 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00120 15 830925 841247 Trre15g00120 15 830925 841247 ECH