Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00111 ATGAAAACCTTAACCACACACCACCTTAGCTTCCACCACACTCTCTCTTCTACTCACAATTCCTTTTCCTTTCTTTCTCTCTCCCCAACCTTCCCAAAACCATCTTCCACAACAAAAAAAATCACAGCTCAGAAACCCAATCACAACAACAATGGCAGTATAAGAGTGAAGGGAAAAAAGGAGAATGTTTGGAGTGTTGACAATGACCTTGCAAAAGCGAGTTCTTCTCAGAAAGAGAAGAAGGAAAGAGGAAGGAAGAAAATGGTTAAGAGGAATAAGGGTAAGAAAGGTGGTAGAGTTATTGTTACTGGGGCTATGTTGATGGAAGTTGAAACTGTTCTTCAGACTCAGGAACCGGTAATAAAACCAGCATGGAACACATTTGCTAGCAGTCTCAGCGGAATTTGGAAAGGTGTAGGTGCTGTGTTTTCTCCCATCACAGCTGAAATGGAGCCAATGGAAGTAAGTGTTAGAAATGAAAACCTTTACGACTGCTATACTCTTTCCCGTATAGAGGCAGTGCCAGCAGTGCCATCACTTTCAGGTGAACGTATGTCTCAAATTCAAAGAAAGGTTAACTGGGTGACTTTGAATCCTTATGGTGAAATGCCACAACATGTTGAAGGCAATGACATAGCTAAGAATGGTTCCGGTGATCTTAATGCTCCGAAACTCGGGCTGCAAAAATCTGGTGAAAAATTAACAAATCGTGTTTTGCCTACATTTGAATCCTTTGACTTTAAAAAAAGCGACGTCATGGAAGAAGATCTCATGGGCTGTGAACCAGGACTTGTTTACTTTGAAGATGGTTCTTATTCTAGGGGTCCCGTGGATATTTCAGTGGGTAAGGATGATGATTCAAAGTACTATGTCACTCCAACTTTCAAGTTTGAACAATGCTTGGTTAAAGGCTGCCACAAAAGGATCCGTATTGTCCATACTATAGAATTCATAAATGGTGGATCAGAAATACAAATAATGAGAGTTGCTGTGTATGAAGAAGAATGGGTCGGCCCTACTTGTGTCGATGACCAGAGCGGCGATATGGAGTTTGATTTAAAGCCATTTTCTCAAAGAAAAAGAACCAAGCCATCAGAGTTGACAGGGTCCTGGAAAGTCTTTGAGATCAGCGCTACGCCTGTGTACAGTGAGGAGACTAAGGTGGAAGAAGAAGGCGATGCTGCTCCGTATGTCTACCTTTGTACAGAAACTCTGAAGAAGAGAAGCTCACCTGAGAGTACCAACTACTTCGGGGAGGAGGAGAGGCTTGACATGCAAGATATGACCGTGCTATGGCTTCCCGGGGGTGTGACATGCTATGTTGATATCAATAACGATGGTATTCTTTGTATTGGAGTTGGTTGGTACTCCGACGAAGGAATCAATCTTGTGATGGAAAGAGATTATGGGTTGGATGGAAAACTTAAAGATGTGAGATATAAATCAGAGATGAAGAGAAGGTGGTCTAATCCACCTAATGTATAA 1485 0.4202 MKTLTTHHLSFHHTLSSTHNSFSFLSLSPTFPKPSSTTKKITAQKPNHNNNGSIRVKGKKENVWSVDNDLAKASSSQKEKKERGRKKMVKRNKGKKGGRVIVTGAMLMEVETVLQTQEPVIKPAWNTFASSLSGIWKGVGAVFSPITAEMEPMEVSVRNENLYDCYTLSRIEAVPAVPSLSGERMSQIQRKVNWVTLNPYGEMPQHVEGNDIAKNGSGDLNAPKLGLQKSGEKLTNRVLPTFESFDFKKSDVMEEDLMGCEPGLVYFEDGSYSRGPVDISVGKDDDSKYYVTPTFKFEQCLVKGCHKRIRIVHTIEFINGGSEIQIMRVAVYEEEWVGPTCVDDQSGDMEFDLKPFSQRKRTKPSELTGSWKVFEISATPVYSEETKVEEEGDAAPYVYLCTETLKKRSSPESTNYFGEEERLDMQDMTVLWLPGGVTCYVDINNDGILCIGVGWYSDEGINLVMERDYGLDGKLKDVRYKSEMKRRWSNPPNV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00111 494 MobiDBLite consensus disorder prediction 35 53 - -
Trre15g00111 494 PANTHER DIHYDROOROTATE DEHYDROGENASE (DUF3598) 17 491 - -
Trre15g00111 494 SUPERFAMILY Lipocalins 122 339 IPR012674 -
Trre15g00111 494 MobiDBLite consensus disorder prediction 68 95 - -
Trre15g00111 494 MobiDBLite consensus disorder prediction 35 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00111 Trre-Chr15 775982 780361 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00111 K23538 - gmx:100793415 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00111 15 775982 780361 Trre15g00111 15 775982 780361 ECH