Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00104 ATGGCTTCACTCTCAACACTAACACCAACTTCAACTTCTCTTTCTTTCTTCTCTTCTTCAATCTTCTCTAATCCTAATTCAACTATCTTCAAATCCAAATTCAAATTCCTCCCAAATTCAAATTCACATTCAAATTCACTTTCCGTTTCTTGCAAACTCGCTACACTCCCTCTCCTCTCCTTCTCCGGCGACAAAATCGGCGAATCAACTCTTGACATCAAATCTGCTCCTCCCTCCACCTCCCGCGCCGTCGTCCACCGCGCCATCGTCCACGACCTCCAAAACAAGCGTCGCGGCACTGCTTCAACCCTAACTCGCGGCGAAGTACGCGGTGGTGGAAGAAAACCCTACGGACAAAAGAAAACCGGCCGAGCACGTCAAGGTTCAACACGTACACCGCTCCGACCAGGTGGTGGTGTGATTTTCGGTCCGAAACCGCGTGATTGGAGTATCAAGATTAATAAGAAGGAGAAGAGGCTTGCGATTTCGACCGCGGTTGCAAGTGCGGCGGTGAATACTGTTGTGGTGGAGGAATTTGATGAGAGGTTTGAGGGGAAAGCGAAGACGAAGGAGTTTATTGCGGCGATGAAGAGATGGGGAGTTGATCCGAAGGAGAAAGCTACGTTTTTTATGTTGGAGGTTTCGAATGAAGTGTTGCTTGCTAGTAGGAATATTGGGAGGTTGAAGATATTGACGCCGAGAACCTTGAATTTGTATGATATTTTGAATGCTGATAAGATTGTGCTTACTCCTTCTGCTGTGGATTACTTGAATGGTAGGTATGGGGAAAATTATCAAGATGATGATGGTGACTATGATGATGAGGAGGAGGATGAGGATGACAATGTAGAAGAAGAAGTAGTAGAGAATGTCGAAGAAGGACCTGGCACAGAAGAAAGTCCGGATGTGGTGAATTGA 918 0.463 MASLSTLTPTSTSLSFFSSSIFSNPNSTIFKSKFKFLPNSNSHSNSLSVSCKLATLPLLSFSGDKIGESTLDIKSAPPSTSRAVVHRAIVHDLQNKRRGTASTLTRGEVRGGGRKPYGQKKTGRARQGSTRTPLRPGGGVIFGPKPRDWSIKINKKEKRLAISTAVASAAVNTVVVEEFDERFEGKAKTKEFIAAMKRWGVDPKEKATFFMLEVSNEVLLASRNIGRLKILTPRTLNLYDILNADKIVLTPSAVDYLNGRYGENYQDDDGDYDDEEEDEDDNVEEEVVENVEEGPGTEESPDVVN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00104 305 MobiDBLite consensus disorder prediction 91 139 - -
Trre15g00104 305 MobiDBLite consensus disorder prediction 267 296 - -
Trre15g00104 305 FunFam 50S ribosomal protein L4 44 269 - -
Trre15g00104 305 PANTHER 50S RIBOSOMAL PROTEIN L4 10 266 IPR013005 -
Trre15g00104 305 Pfam Ribosomal protein L4/L1 family 81 259 IPR002136 GO:0003735|GO:0005840|GO:0006412
Trre15g00104 305 NCBIfam 50S ribosomal protein L4 81 258 IPR013005 -
Trre15g00104 305 Gene3D - 39 274 IPR023574 GO:0003735|GO:0005840|GO:0006412
Trre15g00104 305 Hamap 50S ribosomal protein L4 [rplD]. 61 262 IPR013005 -
Trre15g00104 305 MobiDBLite consensus disorder prediction 259 305 - -
Trre15g00104 305 SUPERFAMILY Ribosomal protein L4 55 262 IPR023574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00104 Trre-Chr15 735695 738125 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00104 K02926 - fve:101296268 343.969