Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00096 ATGGCTTCTACGGCTGTTGCAACCGCTGCTGATTCGCCGCAACATCCAATCACCGAACCCTCTCTTGATCCTAACGATTCTTCCAATTCTTCTCCTAACTTCTTCGCTGATGCTGAATCTCAGTCTCCAGATGTATTGAAGAGCGAAGAGTATCGTCAATTGTTTCGTCTTCCACAGGAAGAAGTCCTTATTGAAGATTTTAATTGTGCCCTCCAGGAAAACATACTTATTCAGGGTCACATGTACCTCTTTGTCAACTTCATTTGTTTCTACTCGAACATTTTTGGGTTTGAGACAAAGAGAATTATCCCGCTCCCTGAAGTCACAGGCGTACGGAGGGCAAAGACAGCTGGGATCTTTCCCAATGCCATTGAGATTATTTCCGGAAGCAGGAAGCACTTCTTTGCATCCTTCCTATCCCGCGATGAAGCTTTTAAGATTATTAATGACGGATGGTTGCGACAGGTCAATGATGCCAGATTAATCATGGAACAACAGGAATCAATATCCGAACTCAGCAGCCAAGAGAATGGATTTGTAACTGTTGACAATATTAAAAGTTCTGATATACTTGACAATGAGGCACTTTCTACTGACCCGAGCCGAGATACTTCTATGTGCAAAGATGAGGGAGTTCCATCCGTTCTTGGAGAAGACCCTACATTGATGGTCGTTCCAGAGAAGCAATTGAGTGTTGAACAGATTGCTGAGTCTGAATTGAATAATAATCCCCCTAGTGTGAGTTCGAACTGGAATGAAGAGGATATTGATGCTCCGACAACCCCAGAAGGTTATACGTGTGTTGCAGAATCAAAGTTTCCGATAAAGGTTGAAGACTTCTTTAGGTACTTCTTCTCGGATGATGCAATAAATTTTCTTGAGTCTTTTCGCAAACAATGCGGCGATAAAGACTTCAAGTGTGCTTCATGGCATCCTCAAGAGAAATTTGGGTATGCTCGTGAACTGTCATTTCAACATCCAATAAAAATTTATCTTGGAGCAAAATCGGGTGGCTGCCATGAGGTTCAGAAATATCGAGTTTATAGGAACAGCCATTTGGTTATACAGACATCGCAAGAAGTCAGTGACGTACCTTATGCAGATTATTTTCATGTTGAGGGATTGTGGAATGTAGAGAGAGAAAAGGATGAATCAAAAGAACGCTGCATTTTACGGGTATATGTGAATGTGGCATTTTGTAAGAAAACTATTTGGAGAGGCAAAATAGTACAGTCAACAGTTGACGAATGCAAAGAGGCTTATGGATCATGGATAAACATGGCACATGAGTTCTTGAAACAGAAGAACCTTGTAAAACAAGTTCAAAATGGCAAAATGATTTTTGATAGAGAAGCAAAGACAGGAGAAACTTCAGAAGGATCACAGGATCAAAGTAATCCTACAGGGAGAGAAACTACATCCAATGCCATTGATGATATTCGCAATGTTAGTACTCAATTGCAAGGAAATTTCATTGGCACGCCGTTTGTACCATCTTTGTTCAGAGAGTTTGCCACAAAGATTAGGTCATCTTTGAAAAATCAGAGCAATCTTTCGCTGCTCCTTGTTACCATTTTTGCTCTGATTTTCTTCATGCAGCAGTTTAGTATACTGATGCTGTTGGCCAGACCTCAACATATACATATGAACCCTCCTGTAGATTTTATGAATAAAATGGACAATGGAGTGACTAGAAATCCTTCGGACATAGCGTGGTTAGAGAAAAGAGTTCATCACCTTAAAGATGAGATGTACATGGTTGAGACTAGGCTTGAAAGAATGCGGTATGAGCATGCACTCTTAAAAAAGCAACTAAAAGATCTAGAACATAAATAG 1836 0.4047 MASTAVATAADSPQHPITEPSLDPNDSSNSSPNFFADAESQSPDVLKSEEYRQLFRLPQEEVLIEDFNCALQENILIQGHMYLFVNFICFYSNIFGFETKRIIPLPEVTGVRRAKTAGIFPNAIEIISGSRKHFFASFLSRDEAFKIINDGWLRQVNDARLIMEQQESISELSSQENGFVTVDNIKSSDILDNEALSTDPSRDTSMCKDEGVPSVLGEDPTLMVVPEKQLSVEQIAESELNNNPPSVSSNWNEEDIDAPTTPEGYTCVAESKFPIKVEDFFRYFFSDDAINFLESFRKQCGDKDFKCASWHPQEKFGYARELSFQHPIKIYLGAKSGGCHEVQKYRVYRNSHLVIQTSQEVSDVPYADYFHVEGLWNVEREKDESKERCILRVYVNVAFCKKTIWRGKIVQSTVDECKEAYGSWINMAHEFLKQKNLVKQVQNGKMIFDREAKTGETSEGSQDQSNPTGRETTSNAIDDIRNVSTQLQGNFIGTPFVPSLFREFATKIRSSLKNQSNLSLLLVTIFALIFFMQQFSILMLLARPQHIHMNPPVDFMNKMDNGVTRNPSDIAWLEKRVHHLKDEMYMVETRLERMRYEHALLKKQLKDLEHK 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00096 611 MobiDBLite consensus disorder prediction 458 476 - -
Trre15g00096 611 Gene3D - 47 155 IPR011993 -
Trre15g00096 611 ProSiteProfiles VASt domain profile. 264 436 IPR031968 -
Trre15g00096 611 Pfam GRAM domain 51 152 IPR004182 -
Trre15g00096 611 FunFam GRAM domain containing 1B 47 155 - -
Trre15g00096 611 SMART gram2001c 49 115 IPR004182 -
Trre15g00096 611 MobiDBLite consensus disorder prediction 451 476 - -
Trre15g00096 611 MobiDBLite consensus disorder prediction 1 38 - -
Trre15g00096 611 CDD PH-GRAM_GRAMDC 60 152 - -
Trre15g00096 611 MobiDBLite consensus disorder prediction 1 43 - -
Trre15g00096 611 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 11 609 - -
Trre15g00096 611 Pfam VAD1 Analog of StAR-related lipid transfer domain 268 415 IPR031968 -
Trre15g00096 611 Coils Coil 591 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00096 Trre-Chr15 673932 686291 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00096 - - tpra:123883421 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00096 15 673932 686291 Trre15g00096 15 673932 686291 ECH