Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00079 ATGGGGATGATCATGAGTTACATGGGAGGAACAGGTGAGGGATTAGCATCCCAGACTTTAAGTCTTGTATCAGGAGCACTCTATGATCAATTTATGAAGAAAGAAGTCAAAAGCTTTGATGCCTTCCACACTGCCATTCTTGATATATTCAACACTATCAACATGGCCTTGCCCGGTAAGCATTATGATGTACCATCAAACAAGGAAATTGAGAACTTTTTTAAACAATGGAATGAATCCAAGGAAGAAAATAAGAAAACTATTTTCACTGATTTCATGATTAAGTATGTAAATATCAGCAAAGTAGATAATTCTATGATGATCACTGGAATAGTGGCACCTCCAGCAGCTATGGTAGCCAAGAGATCAGGACAATCAGTTCCTCAGTTAAGTGCTTTGAAAGTCATTCCTGATGTTATCTTTGTACCAACTGCTACAATTATGGCTCTCATTGCTGTCAAGGTTACCAAAAGAATGTCAATCAAGAAATTGAATCCTCTTTAA 504 0.371 MGMIMSYMGGTGEGLASQTLSLVSGALYDQFMKKEVKSFDAFHTAILDIFNTINMALPGKHYDVPSNKEIENFFKQWNESKEENKKTIFTDFMIKYVNISKVDNSMMITGIVAPPAAMVAKRSGQSVPQLSALKVIPDVIFVPTATIMALIAVKVTKRMSIKKLNPL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00079 167 PANTHER CALCIUM ION-BINDING PROTEIN 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00079 Trre-Chr15 582018 583058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00079 1 150 EF-hand Containing Proteins AT1G64850 22.293 9.65e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00079 - - cam:101501967 208.379