Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00071 ATGGCAGGCTCAGAAGGATTCGTTGAAGCTGATAATGCAGAAGCCATTATTACAAGAATTGAACACAAAACCCGCAAGATCGAAAGCTTACTCAAACAGTATAAACCTGTGGAAGCCCTTAAAACTGCACTTGAAGGAACCTATGCCATGACAAGTGATGAGCGTTGCAAGTCGGCGCATTGGATTGTTGTGCATAGAGCAATAATGGCTATAAAAGATGTGGATGGAATGCTTTCTTCCTTGGATCCTGAATACTATGATATTCTAATGAAGTGA 276 0.4094 MAGSEGFVEADNAEAIITRIEHKTRKIESLLKQYKPVEALKTALEGTYAMTSDERCKSAHWIVVHRAIMAIKDVDGMLSSLDPEYYDILMK 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00071 91 SUPERFAMILY Arp2/3 complex 16 kDa subunit ARPC5 8 91 IPR036743 GO:0005885|GO:0015629|GO:0030833|GO:0034314
Trre15g00071 91 PANTHER ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARC 9 91 IPR006789 GO:0005885|GO:0015629|GO:0034314
Trre15g00071 91 Gene3D - 17 91 IPR036743 GO:0005885|GO:0015629|GO:0030833|GO:0034314
Trre15g00071 91 Pfam ARP2/3 complex 16 kDa subunit (p16-Arc) 12 91 IPR006789 GO:0005885|GO:0015629|GO:0034314
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00071 Trre-Chr15 555865 556682 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00071 K05754 - gmx:100809745 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00071 15 555865 556682 Trre15g00071 15 555865 556682 ECH