Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00068 ATGGCATTAATGGCTGGTTGTCAAGCTGTTTTGGAAGGAAGTCTTCAATTGAGTGGATCAAACAGATTCAGCAGCAGCAACAAGGTGGTAACAACACGTTCATCAGTGTCTGTTAGAGCACAACAACAACAGGAAAGTAGCAGAAGAGCAGTTATTGGTCTTGTTGCAACTGGTTTGGTTTCTTCCTCTTTTGTTCAAGCTGTTCTTGCTGAAGCCATTCCTATTAAAGTTGGTGGCCCTCCTCCACCTTCTGGTGGCCTTCCTGGAACATTGAACTCTGATGAAGCAAGAGACCTTAAGCTACCATTGAAAGACAGGTTCTACCTTCAACCATTGACACCTACTGAGGCAGCTGCAAGAGCTAAGGTATCAGCAGAGGAAATTGTTGCTGCTAAGAAGTTCATTGACCAGAAGGCTTGGCCATTTCTTCAGAACGATCTCCGTCTCAGGGCTGGCTATCTTCGATATGACCTTAACACTATCATCTCCTCAAAGCCTAAGGACCAGAAACAATCCCTCAAGGAACTCACAGGAAAGCTCTTCCAGGATATCGACAATCTGGATTATGCAGCCAAAAAAAAGAACTCCTCAGATGCAGAGAAGTACTATGCTATAGCTGTATCTACTCTGAATGACGTTCTTAGCAAAATTGGTTAA 657 0.4384 MALMAGCQAVLEGSLQLSGSNRFSSSNKVVTTRSSVSVRAQQQQESSRRAVIGLVATGLVSSSFVQAVLAEAIPIKVGGPPPPSGGLPGTLNSDEARDLKLPLKDRFYLQPLTPTEAAARAKVSAEEIVAAKKFIDQKAWPFLQNDLRLRAGYLRYDLNTIISSKPKDQKQSLKELTGKLFQDIDNLDYAAKKKNSSDAEKYYAIAVSTLNDVLSKIG 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00068 218 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 17 218 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Trre15g00068 218 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 25 218 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Trre15g00068 218 SUPERFAMILY Oxygen-evolving enhancer protein 3, 107 217 IPR023222 -
Trre15g00068 218 Gene3D - 71 218 IPR023222 -
Trre15g00068 218 FunFam Oxygen-evolving enhancer protein 3 71 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00068 Trre-Chr15 527951 529494 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00068 K08901 - gmx:100306034 273.092