Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00060 ATGCATGTGAGCAGAGCAGGGAGAGAGTTTAGAACTTTGAGAGCCAGAAGCTTTGGAACTCAAAAGTTGTTGGAGGAACATATTTTCAGAAAAGGTGATATCATGGGATCTTCTGCTGAATATCATATCCACCAAATAATTAACATTCCAGAAAAGGTAGAACCTTCCCCTTGGCCTCAATGTTATATCTATAATGTTCCTGCCATTCTTTTGAAGGTGAAAGAGGAATCCTTTACACCTCTACTGATATCAATTGGTCCTATACACCATAACAAGGAAAAACTTAAGGAAATGCAAGAACAAAAAGAAAGATATTTTCATTTCTTTTGGAATCGCCTAGAACAAAAAAGCGATTTAATGAATTACAAAGCCTTCCTTGAACAAGAAGAAAAACATATACGCGACTGTTACCAAAAGAAATTCACTGATATCAGTAACGAACAATTTGTGGAGATGATAATGTTAGATGCTGTGTTCATCATGGAGTTGTTTCTAAGAGAAAATAGAAAATGGGAACACAAAGATGATTATATAGTAACTCAACTTTGTTTAAGCAAAAGTATTCAACGCGACTTGTTGCTTCTCGAGAATCAGCTTCCAATTTATGTGTTGGAAAAACTATACGACACAGTTGTTCCAAGCAGTGTCAAAAAGCATAACTGGTTTCTCAATCTTGCTCACGAGTATTTTGCATGCTTTTATCCCTATCGCAAGGAATCATCAGAAAAAAAGTTTGGGGCAAAGAAGTGGGAGAAATCACTTCATTTCACTGATTTGATTAGATGTTCTTATCTCCCTATGAAACTAGGCACTCAGTATAATGATCCTCACAGAGAGTGTTTGATGTTAAGGACTGCAACAAAGTTGAATGAAGCTGGTATAAGCTTTGAGAAGGTTCATAATAGAAGCTTACTTGACATAAAGTTTGAGAAAAAACCCTTTCTGAGTTGGTTTCTTTGCTTAGGCTGCTTGCCATGTTTCAAGTGTGTCAAAGCTAGATTTCTATTTCCACAGTTAAAAGTAGACCACACAACCGAATGTGTTCTTAGGAACCTAATCGCTTTCGAGCAGTCTCATTATCCTGATGAGCCTTATGTTTGCAATTATGTTTCTTTGATTGATTCTCTTATTCACACCAAAGATGATGCAGAGTTGCTGGTTGAGAAAGAAGCCGTTGTGCATGAACTGGGAAGCAATGAGGAGTTAACAAGTCTTGTTAACAGTCTATGCAAACACGTTGTGACGAATTCATCATGTTATTCCCAACTTATGGAAGATCTTAATGATCACTACAACAGTGAGTGGAAAAGAGCTATGGGAACATTAAGGTGGGTTTACTTCCGCGATCCTTGGAGAAGCAGTTCGACCATAGTTGGGATAGCTGTTCTAATATTCACCATCTTCAACTTTCGTCGTGTTCTTGATCTAATGTTTTAG 1437 0.3723 MHVSRAGREFRTLRARSFGTQKLLEEHIFRKGDIMGSSAEYHIHQIINIPEKVEPSPWPQCYIYNVPAILLKVKEESFTPLLISIGPIHHNKEKLKEMQEQKERYFHFFWNRLEQKSDLMNYKAFLEQEEKHIRDCYQKKFTDISNEQFVEMIMLDAVFIMELFLRENRKWEHKDDYIVTQLCLSKSIQRDLLLLENQLPIYVLEKLYDTVVPSSVKKHNWFLNLAHEYFACFYPYRKESSEKKFGAKKWEKSLHFTDLIRCSYLPMKLGTQYNDPHRECLMLRTATKLNEAGISFEKVHNRSLLDIKFEKKPFLSWFLCLGCLPCFKCVKARFLFPQLKVDHTTECVLRNLIAFEQSHYPDEPYVCNYVSLIDSLIHTKDDAELLVEKEAVVHELGSNEELTSLVNSLCKHVVTNSSCYSQLMEDLNDHYNSEWKRAMGTLRWVYFRDPWRSSSTIVGIAVLIFTIFNFRRVLDLMF 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00060 478 Pfam Plant protein of unknown function 63 464 IPR004158 -
Trre15g00060 478 PANTHER BNAC04G53230D PROTEIN 42 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00060 Trre-Chr15 485734 490205 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00060 - - gmx:100818118 684.871