Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00057 ATGGATTCAACATCAAAAAAGCAAACTCCAGAACATTACCAAAACGTGATCGTAATGAGACACGGCGATCGCATCGACAACTTCGATCCATTATGGATAGCCACAGCACCTCGACCGTGGGACCCACCTCTCGTTAAGGAGGGTCGGATTCGGGCTTTCTCTACGGGTCGGAAGTTTCGTAACCTTTTCGGATATCCACTTCATCGTGTTTTCGTCTCACCTTTCCTCCGCTGCATTCAGACGGCAGCAGAAGCCGTCATCGCCCTCTCCGCCGTTCATGATAACCCCGACGCACTCACCGGTCATTCTGTTACCATCGATCCTTCCAAACTCAAGGTCTCTGTTGAATATGGGTTATGTGAAATGATGAGTACAATGGCAATTAAGCTTGAGGTGGCTCCTAAAGATGGAAATTGGGGTTTCCACATTTCAGAGCGTGAGGCCATGCTTCCAAAAGGTACCGTGGATAACACTGTAGAAAGGGTCTATAAAGAGTTGCCTGTGTGGGAGGAAGAGCTTTCGCGCACCAGGGCTAGATATCAGCAAATAGTTAAAGACCTTGCTGATAAATATCCTACTGAAAACTTGCTCCTTGTCACACATGGGGAAGGAGTTGGGGTGGCTCTATCTTCATTCAGAAAGGGTGCTGTAGTATGTGAAGTTGACTATTGTGGTTATGTGGAACTCAGACGCCCGATTTTCAAGAAAGATCAGTCATTTACTGCAGGAGAATTTGAAGTGCTTACTAATGCTGGTCAAACTGGCGTAAAATATTCCGATCTAAAAGAACTTTGA 795 0.4616 MDSTSKKQTPEHYQNVIVMRHGDRIDNFDPLWIATAPRPWDPPLVKEGRIRAFSTGRKFRNLFGYPLHRVFVSPFLRCIQTAAEAVIALSAVHDNPDALTGHSVTIDPSKLKVSVEYGLCEMMSTMAIKLEVAPKDGNWGFHISEREAMLPKGTVDNTVERVYKELPVWEEELSRTRARYQQIVKDLADKYPTENLLLVTHGEGVGVALSSFRKGAVVCEVDYCGYVELRRPIFKKDQSFTAGEFEVLTNAGQTGVKYSDLKEL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00057 264 Gene3D - 12 235 IPR029033 -
Trre15g00057 264 PANTHER UBIQUITIN-ASSOCIATED AND SH3 DOMAIN-CONTAINING BA-RELATED 5 257 - -
Trre15g00057 264 SMART PGAM_5 15 208 IPR013078 -
Trre15g00057 264 CDD HP 16 83 - -
Trre15g00057 264 Pfam Histidine phosphatase superfamily (branch 1) 17 88 IPR013078 -
Trre15g00057 264 FunFam Phosphoglycerate mutase family protein 12 235 - -
Trre15g00057 264 SUPERFAMILY Phosphoglycerate mutase-like 15 213 IPR029033 -
Trre15g00057 264 PIRSF PRIB5 1 263 IPR012398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00057 Trre-Chr15 473106 474596 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00057 - - gmx:100811704 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00057 15 473106 474596 Trre15g00057 15 473106 474596 ECH