Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00028 ATGGTGGATCTTGAAATCGTATGCTGCATGTGTGGTGACGTTGGTTTCAGAGATAAACTTTTCCGCTGCAACAAATGTGGCCACCGCTTCCAACACTCGTATTGTAGTAACTTGTATGGAGAATTAGCAGCGGAGGAGATACAAGAGTGTGATTGGTGCCAAACCGAAGCAGCTGCTGCTGGCTGCAGGAAAAACACCTCCAATTCCAAGAAACCACCAGCGGTGACCGTAGTAACAAATTCTTCTGGATGTTCCTCCTCCGGCGACAAAATGATGAAGCGGAAGAGTCCAATACCTTCACCTAGACATGCCACACGCAGGTATAAGCTTCTCAAGGATGTAATGTGTTGA 351 0.4701 MVDLEIVCCMCGDVGFRDKLFRCNKCGHRFQHSYCSNLYGELAAEEIQECDWCQTEAAAAGCRKNTSNSKKPPAVTVVTNSSGCSSSGDKMMKRKSPIPSPRHATRRYKLLKDVMC 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00028 116 MobiDBLite consensus disorder prediction 63 89 - -
Trre15g00028 116 MobiDBLite consensus disorder prediction 63 103 - -
Trre15g00028 116 PANTHER EXPRESSED PROTEIN 5 72 - -
Trre15g00028 116 SUPERFAMILY FYVE/PHD zinc finger 4 56 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00028 Trre-Chr15 256371 256801 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00028 - - cam:101500803 145.976