Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00011 ATGCTAAAGATAAAGATTGTGCAAAGAGTAGTAGCGGGATTAACAGTTCTGTTGGGATTATTGGGCAACCTGGTTTTGAGGCTGCATGGGCATAAACAGAGGCTCCATCCTGAGAAGCTACAGATGATGATCAGATCAAAATTAGATTCATCTTCGGAGATGGCGGTGGTTGATGATGATGAGAGGTATGGTTTGAGCTGGAGGTTGGCGGTGGAGACAAACAACAATGCGCGTCCATGGAAAACTGTCCCACTTCGTTGCTACAAACATGTTGAGAATTACATGACTGGTGGACAATACGAGCATGACCTGAATATGATTGTGGATGAAATTGTGGTTTATGCATCTGAGATTCCTCTTGCTACTACTCAACAATATGCGTGGATTTTGGACGTGGATGATACTTGTATCTCTAACATTCCTTATTACAAAGCTAAGCGATTTGGATGCGATCCATTTGATTCGCCTGTTTTCAAGGAATGGATTACCAAGGGAATGTGCCCTGCAAATCCCGTGATACTAAGATTGTTTAAAACATTGATAGAGAGAGGTTTCAAAGTGTTCTTACTAACGGGTAGATACGAAGAAACACTCGCTAAAATCACTATGGACAACTTGCATAACCAGGGATTCATCGGCTACCAACGCCTTATTTTGAGGAGTTTGAAATACAAAGGACAAAGTGCAGTGAAATACAAGTCATCTATTCGGAAGGAGATTGAAGAGGAAGGATATAGAATATGGGGAAATGTAGGAGACCAGTGGACTGATCTACAAGGAGAGTGTTTGGGCAATCGTACTTTCAAGATCCCCAATCCTATGTATTGCATTTCTTGA 837 0.4158 MLKIKIVQRVVAGLTVLLGLLGNLVLRLHGHKQRLHPEKLQMMIRSKLDSSSEMAVVDDDERYGLSWRLAVETNNNARPWKTVPLRCYKHVENYMTGGQYEHDLNMIVDEIVVYASEIPLATTQQYAWILDVDDTCISNIPYYKAKRFGCDPFDSPVFKEWITKGMCPANPVILRLFKTLIERGFKVFLLTGRYEETLAKITMDNLHNQGFIGYQRLILRSLKYKGQSAVKYKSSIRKEIEEEGYRIWGNVGDQWTDLQGECLGNRTFKIPNPMYCIS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00011 278 SUPERFAMILY HAD-like 106 275 IPR036412 -
Trre15g00011 278 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 61 276 IPR005519 -
Trre15g00011 278 NCBIfam plant acid phosphatase 58 277 IPR010028 GO:0003993
Trre15g00011 278 PIRSF VSP 8 278 IPR014403 -
Trre15g00011 278 CDD HAD_VSP 91 277 - -
Trre15g00011 278 Gene3D - 59 278 IPR023214 -
Trre15g00011 278 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 56 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00011 Trre-Chr15 154656 156857 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00011 - - mtr:11436569 453.751