Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre13g05031 | ATGGCATTATTTGAAGCAAAATCCAGTGCATTAGTTACTTTACAAGATCTGCGCCCATCGTCTCCTTTTTTCAAGCAAGGAAAATCACTCAGAATTATTGGAACGTTACAGGAATACTCTTTAGAGACCGGCCTAGCAACCGTTAATGATGGTAGTGACATTCTAAAAGTTAGTATTGAGCAGCTGAAGGACCTTAAGTTTCAAGTTGGCTCTGTCTACCAATTCATTGGTGAACTCCTTATCCAACCTGATAATAAGGGTGTTTTGCAGGCACGTGTTGGTAGAAATGTTGACGGGATTGATCTCAATCTTTATCATCAGTCGTTGCTGCTTTTGAGACAGTTCCAAGCCAATCATTTGAATAATTCAGCAACTTAA | 378 | 0.3942 | MALFEAKSSALVTLQDLRPSSPFFKQGKSLRIIGTLQEYSLETGLATVNDGSDILKVSIEQLKDLKFQVGSVYQFIGELLIQPDNKGVLQARVGRNVDGIDLNLYHQSLLLLRQFQANHLNNSAT | 125 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre13g05031 | 125 | Gene3D | - | 7 | 121 | IPR012340 | - | |
| Trre13g05031 | 125 | FunFam | CST complex subunit TEN1 | 6 | 122 | - | - | |
| Trre13g05031 | 125 | Pfam | Telomere-capping, CST complex subunit | 7 | 118 | IPR029146 | GO:0003697|GO:1990879 | |
| Trre13g05031 | 125 | PANTHER | CST COMPLEX SUBUNIT TEN1 | 1 | 125 | IPR029146 | GO:0003697|GO:1990879 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trre13g05031 | Trre-Chr13 | 56298740 | 56301325 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre13g05031 | K23313 | - | gmx:100305519 | 204.527 |