Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04981 ATGTCATTCTCTTTCTCTTCAACCTCCGTTTCATTCTCCGAATCTTCATTCTCACTCCCAAGATCAACTCATCAATGCTCAAATTTCCACACAATCACGTGTGCATCAAACAACTTTCATTCAGTAGCAAGTGTTGGAGGTTCTACCTTCTGTCGAAGATTTCGTGGTTTCAAACTGTGGATACTTGACAGACTCAATCTCCAACATCTGAAGAAGCCTAACTGTCGAAATCACTTCAAGAATGATATTGAAACAGAAGGATCAATTTCCGATTCATCTCATGTACCTGATGATGGTAATGTCTCTTCTTCCATGGAATCTCCATCTTTGCTGCTAACAAGTCCCTTAACCTCTCGTCTGGATGATAGTGGAGAACCTTCACTTTGCATCGCTGTCATAGGAGCCACTGGTGAGCTGGCAAGGGGGAAGATTTTTCCAGCTTTATTTGCACTCTACTATAGTGGCTTTCTTCCTGAGAACGTGGCTATTTTTGGGTATTCAAGGAAGAATATAACTGACGAAGACCTACGATCCATTATCGCTTCAACATTAACATGCCGAGTTGATCACCAACAGGATTGTGGGGACAAAATAAAAGCTTTCCTTGATAGAACACACTACATCAATGGAGGTTACGACAACAAATATGGGATGTCCTTATTGAAGGCCAGAATGGAGCAAATTGAGGGAAGATCCAAGGCCAACAGGATTTTCTACCTTTCCGTGCCACAAGAAGCACTTTTGGATGTTGCTTCATGTCTTGCTAGCAGTGCTCAGACCCAAAAGGGATGGAATCGCATAATAACTGAGAAGCCATTTGGCTTTGATGCTCTCTCTTCCCAAAGGCTGACGCAATATCTTCTCTCGAAGTTTGAGGAAAACCAACTATATAGGATTGATCATCTTCTAGGAAGGAATCTCATTGAAAATCTCACAGTTCTAAGGTTTGCCAATCTAGTTTTTGAGCCTCTATGGAGTCGAACTTACATAGATAATGTGCAGGTCATTTTATCAGAGGACTTGGCTGTGCATCCAGGAAGGTATTTCGGTGGCTATGGGATTATCCGAGATATTGTTCACAGCCATGTGCTCCAAACAATTGCATTGCTTGCTATGGAACCGCCAATTAGCCTTGATGGAGAAGATATTCGAAATGAAAAGGTCAAGGTTTTAAGATCAATGCGCAAATTGGAGCCTAAGGATGTCATTCTTGGCCAATATAAAGCAAGTAGCAGAGACAAAATTGATAAGTGCTTAGATGGTCCTACGCCTACTTATTTCGCTGCTGCACTATACATCGACAATGCACGATGGGATGGTGTACCATTTTTGGTTAAAACAGGCTTGGGACTCATCAAACACCAAATGGAGATACGGATTCAGTTTCGACATGTTCCAGGTAATGTTTACCATGAATGCATCGGGCACAATATTGACCGTGCCACAAATGAGCTCATTCTTCGGGATGTTCCCGATGAAGCTATTCTGGTGAAAGTTAACAACAAAGTTCCAGGATTAGGCTTACAATTGGATTCTTCAGAATTGAATTTGCTTTACAAAGACAAGTACAACATGGAGGTGCCGGATTCATATGAGCATCTTCTGCTTGATGTCATTGATGGGGATAACCATCTGTTTATGAGAAGCGATGAACTGGCAGCTGCATGGAACATTCTAACTCCAATTATGAATGAGATAGACAAGGACAATATATCAGTGGAGCTTTATGAGTTGGGGGGTCGTGGTCCAGTTGGGGCATACTACCTTTGGGCAAAACACGGCGTCCGTTGGGTAGAGGACTAA 1803 0.4226 MSFSFSSTSVSFSESSFSLPRSTHQCSNFHTITCASNNFHSVASVGGSTFCRRFRGFKLWILDRLNLQHLKKPNCRNHFKNDIETEGSISDSSHVPDDGNVSSSMESPSLLLTSPLTSRLDDSGEPSLCIAVIGATGELARGKIFPALFALYYSGFLPENVAIFGYSRKNITDEDLRSIIASTLTCRVDHQQDCGDKIKAFLDRTHYINGGYDNKYGMSLLKARMEQIEGRSKANRIFYLSVPQEALLDVASCLASSAQTQKGWNRIITEKPFGFDALSSQRLTQYLLSKFEENQLYRIDHLLGRNLIENLTVLRFANLVFEPLWSRTYIDNVQVILSEDLAVHPGRYFGGYGIIRDIVHSHVLQTIALLAMEPPISLDGEDIRNEKVKVLRSMRKLEPKDVILGQYKASSRDKIDKCLDGPTPTYFAAALYIDNARWDGVPFLVKTGLGLIKHQMEIRIQFRHVPGNVYHECIGHNIDRATNELILRDVPDEAILVKVNNKVPGLGLQLDSSELNLLYKDKYNMEVPDSYEHLLLDVIDGDNHLFMRSDELAAAWNILTPIMNEIDKDNISVELYELGGRGPVGAYYLWAKHGVRWVED 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04981 600 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 127 599 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre13g04981 600 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 313 597 IPR022675 GO:0004345|GO:0006006|GO:0050661
Trre13g04981 600 FunFam Glucose-6-phosphate 1-dehydrogenase 299 598 - -
Trre13g04981 600 NCBIfam glucose-6-phosphate dehydrogenase 128 598 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre13g04981 600 MobiDBLite consensus disorder prediction 86 108 - -
Trre13g04981 600 MobiDBLite consensus disorder prediction 88 108 - -
Trre13g04981 600 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 300 598 - -
Trre13g04981 600 Gene3D - 124 298 - -
Trre13g04981 600 Gene3D Dihydrodipicolinate Reductase; domain 2 299 599 - -
Trre13g04981 600 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 126 313 IPR036291 -
Trre13g04981 600 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 119 597 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre13g04981 600 PRINTS Glucose-6-phosphate dehydrogenase signature 266 279 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre13g04981 600 PRINTS Glucose-6-phosphate dehydrogenase signature 290 318 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre13g04981 600 PRINTS Glucose-6-phosphate dehydrogenase signature 437 463 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre13g04981 600 PRINTS Glucose-6-phosphate dehydrogenase signature 359 375 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre13g04981 600 PRINTS Glucose-6-phosphate dehydrogenase signature 341 358 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre13g04981 600 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 132 310 IPR022674 GO:0006006|GO:0016614|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04981 Trre-Chr13 55945575 55950565 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04981 K00036 - gmx:100796541 956.822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04981 13 55945575 55950565 Trre13g04981 13 55945575 55950565 ECH