Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04975 ATGTCATCGATGAGCAGCAGAAGCAGAAGCACGGATTCCAACTCCATGTCCATACGACGTCACTTCAATGAAATCCCTAACCCACAACCACCAACTTCTCTTCATTTATGGTCACAAATCGTCGCCGCTGAAACCCCAGACCATGCCAATCAAATTGATATAGTTTTTCGCAGAAGAAAGCCTCGCAATGACTCAAATAATCTCAACTCAAATCATTCCGATGATATTCCCCGGCGTCCCAGTCGGGTGAGTTTCGCTGATCCGAATAAACGAGTTACTTGGAAACGTTCTCTTTCCACCAGAGGGAGAACAAGTATAGCAGTTGGTGCTTCTATGGTATACCAGCCTGAGCTAAAGAAGGACAAAAGAAAAGGCAAACCACCTGCTCATCCCAAAGGAAAGAATGTTAAACAGCCTAACTTTGACAAGGAGATATCATACTTTCAAGAGGTTGATGCTTTTGAGTTGATGGAGGAGAGCCCTTCTCCGAAGAAAGTTGGGTCATGGATTGTAGGCAACGTGGCAGAAGAGGTCCCAATACCGCCATTATGCTCCAGATTAGAAAGATGGTTATACTCCAGAAGATTTAACCCCAGATGTGGTCCCTCTAGCACACTATCCAAGATCCTTGATACGCCAACAATGAATTTAGAAACTATTCGTGATATTGATTTCCAATTTTCAGACTTGAGATTGAAATCATTGGATCAAAGCGAGCTAAGAAACTCACAATCGCATAACTTCAAAACTGGAGAAAGTAAAGGAAGTTTAAACAATGCAATTCTTATTAAGGATGAAGAGTCTGAAGATATAGAAGCTTGTGTAAAGAAACTTTCTCTGACATCAACATCATCCTCAATATATGATGACCATAATAATCCATTTGCCGTTCTTTTAGAAATTTGTGGACAGTCTGCACCTTCTATGTTACAAGATCTGTTCTCTAGATATAGTGGTTCAGAAAAAGTTGTAAAAGTTGGAGAAGGAACATATGGAGAAGCTTTCAAGGTTGGGAATTGTGTATGCAAAATAGTTCCTTTTGATGGAGATTTCAGAGTGAATGGAGAAATCCAAAAGAGATCAGAAGAATTGCTGGAGGAGGTGCTTCTTTGCAAAACTCTTAATCAATTAAGAGGAAGTGATGGACTTTCAAATAATCTATGCGGCACATTCATAGAATCCATAGAATTTCGGGTATGCCAAGGTTCTTATGATGCGGCTCTGATTCGAGCATGGGAAGAATGGGATCACAAGCATAATTCAGAGAATGATCATCCAAAAGAATTCCCAGAGCAACAGTATTACATGGTCTTTGTACAACAACATGGTGGGAAGGATCTTGAAAGTTTTGTGCTCCTTAATTTTGATGAGGCAACGACTTTACTGGTTCAGGTTGCAGCTGGGCTTGCTGTGGCCGAGTCTGCCTATGAGTTCGAACATCGCGATCTTCACTGGGGAAATATACTTGTCAGCCGAAGTGATGATTCTGCAAAGTTGCAGTTCACTCTTGATGGCAGAAAATTGTTAGTCAAAACATATGGATTGATAATATCTATTATTGACTTTACTCTATCAAGAATAAACACGGGTGATAGCATACTGTACTTAGATCTTTCATCTGATCCTGACCTATTTAAAGGTCCAAAAGGGGACAAACAGTCAGAAACATATCGGAGGATGAAGGATGTGACTGAAGATTGGTGGGAAGGAAGTTTTCCTAAAACAAATGTGTTATGGTTGGTCTACTTGGTAGACATACTCCTCACAAAGAAATCATTTGAACGTACTTTAAAGAACGAGAGAGACCTGCGCTCCTTGAAGAAACGTCTCGACAAGTATGATTCGGCCAAGGAAGCAATTTTTGATCCTTTCTTCACTGACTTGTTTGTTGAGTCTGACCTAATGGCTTAA 1911 0.4045 MSSMSSRSRSTDSNSMSIRRHFNEIPNPQPPTSLHLWSQIVAAETPDHANQIDIVFRRRKPRNDSNNLNSNHSDDIPRRPSRVSFADPNKRVTWKRSLSTRGRTSIAVGASMVYQPELKKDKRKGKPPAHPKGKNVKQPNFDKEISYFQEVDAFELMEESPSPKKVGSWIVGNVAEEVPIPPLCSRLERWLYSRRFNPRCGPSSTLSKILDTPTMNLETIRDIDFQFSDLRLKSLDQSELRNSQSHNFKTGESKGSLNNAILIKDEESEDIEACVKKLSLTSTSSSIYDDHNNPFAVLLEICGQSAPSMLQDLFSRYSGSEKVVKVGEGTYGEAFKVGNCVCKIVPFDGDFRVNGEIQKRSEELLEEVLLCKTLNQLRGSDGLSNNLCGTFIESIEFRVCQGSYDAALIRAWEEWDHKHNSENDHPKEFPEQQYYMVFVQQHGGKDLESFVLLNFDEATTLLVQVAAGLAVAESAYEFEHRDLHWGNILVSRSDDSAKLQFTLDGRKLLVKTYGLIISIIDFTLSRINTGDSILYLDLSSDPDLFKGPKGDKQSETYRRMKDVTEDWWEGSFPKTNVLWLVYLVDILLTKKSFERTLKNERDLRSLKKRLDKYDSAKEAIFDPFFTDLFVESDLMA 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04975 636 Gene3D Phosphorylase Kinase; domain 1 309 441 - -
Trre13g04975 636 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 196 628 - -
Trre13g04975 636 SUPERFAMILY Protein kinase-like (PK-like) 325 531 IPR011009 -
Trre13g04975 636 MobiDBLite consensus disorder prediction 56 88 - -
Trre13g04975 636 Gene3D Transferase(Phosphotransferase) domain 1 443 625 - -
Trre13g04975 636 ProSiteProfiles Protein kinase domain profile. 320 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g04975 636 SMART serkin_6 320 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g04975 636 MobiDBLite consensus disorder prediction 114 139 - -
Trre13g04975 636 Pfam Haspin like kinase domain 264 620 - -
Trre13g04975 636 MobiDBLite consensus disorder prediction 1 33 - -
Trre13g04975 636 FunFam Serine/threonine-protein kinase haspin-like protein 307 442 - -
Trre13g04975 636 SMART DUF3635_2 542 625 IPR024604 -
Trre13g04975 636 FunFam serine/threonine-protein kinase haspin 443 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04975 Trre-Chr13 55882521 55887844 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04975 K16315 - gmx:100790036 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04975 13 55882521 55887844 Trre13g04975 13 55882521 55887844 ECH