Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04904 ATGGATTCAAATGTGAGGGATTTCATAGCAAACGAAGTTCCCGATTGGAACAACGAAGTAATCGCCGTTGCTCGTTTCAAGGCTTTTTCCGGTCAAAGATCCGATTGGCAACCAAATTTCATCTTCTGGAGAGATTTGATTATCAAAATAGCCACTCATTTTCGTTTCCTCATCATTCAACCTTCTCAGGTCAAAAATGATTGGTTTAATCGAGGAGGGTTAACTCCTTTGTGTATCGACGATGTACTGTCTCTAATGTATAATGAAGGTAACATCACAAGACCTAGGGATCTTGTTGATCCAAGGAGTGGAAGATTTTCCCAATTAGTTAGAAAAGTGACCAACTTAATAACCAGACCAGCTACACCGGATATCATGGCTGAAGAATCTGTCATCCTAACTCCTCTGCTTAAGGATAAGGCTGCTGAAGTTGTCAAACATCTTTCAGAAAGTCATTGGAATTCATCTTGTATCATCACGATGAAGAAATTTCAGGAGGTATGTGGAGGGCCGGATGAAGCTTCTGTAATGTTGAGGTATTTGTCAGGGTGTAGGACAGCGCAGTATCTGTCAGTCCGTAAGAATGAGTTTGTAGAGGGGGTAAAAATTTCGCTCTCAGCAGCAGCATTATCCAGCGTCTCTAATTTAGATTGTGATGTACTGTACTTGATTAGGACAGTTGAGAAGCTTCAGCAACAATTAGATGTGATTGACAGGCGCTGTGAATTGTCAAGAAAATCAGCAGTGGCTTCTCTACATTCCGGGAACAGAAAATTAGCCCTCAGGTATGCAAGGGAGCTGAAGTTGGTCAACCAGAGTAGGGAAAAATGTTCATCACTTTTGAATAGAGTAGAAGAAGTATATGGTGTTATTGTTGACGCCGAGTCAACAAAAACGGTTACTGAAGCTATGCAGATTGGAGCACATGCTATTAAAGAAAATAAGATAAGCGTGGAAGATGTTGATGTTTGTTTAAGAGATCTCCAAGAGAGCATTGATTCACAGAAGGAAGTCGAAAAGGCACTAGAGCAAACTCCATCATACACAGATATCGACGATGAAGATATTGAAGAGGAACTCGAAGAGTTAGAGCTGGCTCTTGAGAAAGAAGCTCAAGTTGATACACCAGAAAAGACTATTACCACTGAAGAAGGAACTGCAACTTTGGAAGCCTCTGAATTACTTAGTGACACTCTCTCAAATCTCAAACTTTCAGACAGTCCAGCCGTGAAGTCAAGAACCACTCAGGCAATGTCAGGAGAGAAAACAGCAAATTTAGTAATGTAA 1287 0.4087 MDSNVRDFIANEVPDWNNEVIAVARFKAFSGQRSDWQPNFIFWRDLIIKIATHFRFLIIQPSQVKNDWFNRGGLTPLCIDDVLSLMYNEGNITRPRDLVDPRSGRFSQLVRKVTNLITRPATPDIMAEESVILTPLLKDKAAEVVKHLSESHWNSSCIITMKKFQEVCGGPDEASVMLRYLSGCRTAQYLSVRKNEFVEGVKISLSAAALSSVSNLDCDVLYLIRTVEKLQQQLDVIDRRCELSRKSAVASLHSGNRKLALRYARELKLVNQSREKCSSLLNRVEEVYGVIVDAESTKTVTEAMQIGAHAIKENKISVEDVDVCLRDLQESIDSQKEVEKALEQTPSYTDIDDEDIEEELEELELALEKEAQVDTPEKTITTEEGTATLEASELLSDTLSNLKLSDSPAVKSRTTQAMSGEKTANLVM 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04904 428 Gene3D - 222 379 - -
Trre13g04904 428 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 183 382 IPR005024 GO:0007034
Trre13g04904 428 Pfam Snf7 225 376 IPR005024 GO:0007034
Trre13g04904 428 Coils Coil 325 345 - -
Trre13g04904 428 Coils Coil 353 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04904 Trre-Chr13 55385844 55389385 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04904 K15053 - gmx:100783674 593.578