Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04891 ATGGATGAAGATTCAGCTCGTCCCATCAGAATGATGAACTTTGTTTCTGAAGAACAACAAGTAGAATCTAAAAAAACAAGGGGCGAACGAGTTGAAGATGGCACTGCCCACAGGGACAGACCTCTCTATGAGATTCTAAAGGAGAATAAGGACAAGAAGGATGCTGAATTTAATGAAAGGTTCAAACATAGACCTCCCAAGGCTTTAGACGAAGATGAGACTGAGTTTCTTGATAGTTATGAATCATCAAAAAGGGAATATGAACGAAAATTGGCAGACGAGGAAGCCCAACAACTAAGAAGCTTTCAAGCAGCAATAGCAGTGCAGTCCAATACTGTGCACGAAGTTAAGGAAAAGTCTCCTGTACTTGCAGTCCAGGAAGAAAAGCCTGTTGCTGGAAAGAAGAATCCAGCTTCTCGCCCATTAAGCATGATTATAAAAGTCAAGCCTCAAGCTAAAAAAGCCAAGTTGGATGAAGGAAATGCTGAAGAAGTTTCAAAAGCAGGAATTACTTCTGTGAATGATAAGAGTAAACCTTTAGAACCAGTACAACCAGTGAATGACATAGATAAAAAGTCAAATGAAGTTGCTTTAACTGGCCTTGTTTCATATAGTGACGAAAGTGATGATGACTCGTAG 639 0.3991 MDEDSARPIRMMNFVSEEQQVESKKTRGERVEDGTAHRDRPLYEILKENKDKKDAEFNERFKHRPPKALDEDETEFLDSYESSKREYERKLADEEAQQLRSFQAAIAVQSNTVHEVKEKSPVLAVQEEKPVAGKKNPASRPLSMIIKVKPQAKKAKLDEGNAEEVSKAGITSVNDKSKPLEPVQPVNDIDKKSNEVALTGLVSYSDESDDDS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04891 212 Coils Coil 77 97 - -
Trre13g04891 212 PANTHER NEFA-INTERACTING NUCLEAR PROTEIN NIP30 3 212 IPR039845 -
Trre13g04891 212 MobiDBLite consensus disorder prediction 17 41 - -
Trre13g04891 212 MobiDBLite consensus disorder prediction 153 192 - -
Trre13g04891 212 MobiDBLite consensus disorder prediction 20 41 - -
Trre13g04891 212 Pfam FAM192A/Fyv6, N-terminal domain 18 102 IPR019331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04891 Trre-Chr13 55315921 55318249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04891 - - gmx:100780978 335.109