Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04880 ATGAATAGGCAGCATTTGCTGACCTATATCTACCTTCTGGTTTATATTTCACTTTCCTCGGGTGTTATTTTGTATAACAAGTGGGTTCTGTCTACGCTCTATTTTAATTTTCCATTTCCAATAACACTCACTATGATTCATATGGCTTTTTCTGGTGGAGTTGCATTTGTCCTTATCCGTGTTCTGAAGGTTGTAGCGCCTATTAAAATGACATTTCATATATATATAACCTGTGTGGTCCCTATAAGTGCCTTCTTTGCAGCAAGTCTGTGGTTTGGGAACACTGCTTATTTGTACATTTCTGTGGCTTTCATCCAGATGCTTAAAGCCTTGATGCCAGTGGCAACATTTCTTGTGGCTGTTACTCTTGGAACTGAGAAATTAAGGTGTGACGTATTCTGGAACATGGTGTTGGTTAGTGTTGGAGTTGTCATTTCCTCTTATGGGGAAATTCATTTTAACGTGCTCGGTACGGTTTATCAAGTATCGGGAATAGCTGCTGAAGCATTGAGGCTGGTCTTAACTCAAGTTCTTCTTCAAAATAAAGGCTTGACACTAAATCCTATTACCAGCCTGTATTACATAGCCCCCTGCAGCTTTGCATTCCTTTTTATTCCATGGTATATCCTCGAGAAGCCTGAGATGGAAGCTCCACATATGGAGTTTAACTTCTGGATATTTTTTTCAAATGCTCTTTGTGCTTTGGCATTGAACTTCTCAACATTCTTAGTGATTGGTAGAACTGGGGCTGTAACTATTCGAGTGGCTGGAGTTTTGAAAGACTGGCTACTTATCTCTCTTTCAACTGTCTTATTTCCTGAATCTAAGATTACAGGACTGAATGTCATTGGCTATGCTATTGCTTTAAGCGGTGTTGTTTGTTACAACTACCTGAAGATTAGGGATGTGCGCAAATCTCTACTTCAAATTATCCCTGACGAATCAGCAAAGGAGCTGCTAATGGAGAAAAAGGAAGATGATGATGTGAACAGCAATGAGGATATATGGAATAATTCAGTTTCTGATTCTCATCATCATTCTCAGTTTGATGAAGAAGCGCCTTTAATGTATTCATCACGGATATCTCATCTTGGAAGAAAACCAGCTTAG 1110 0.3928 MNRQHLLTYIYLLVYISLSSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGGVAFVLIRVLKVVAPIKMTFHIYITCVVPISAFFAASLWFGNTAYLYISVAFIQMLKALMPVATFLVAVTLGTEKLRCDVFWNMVLVSVGVVISSYGEIHFNVLGTVYQVSGIAAEALRLVLTQVLLQNKGLTLNPITSLYYIAPCSFAFLFIPWYILEKPEMEAPHMEFNFWIFFSNALCALALNFSTFLVIGRTGAVTIRVAGVLKDWLLISLSTVLFPESKITGLNVIGYAIALSGVVCYNYLKIRDVRKSLLQIIPDESAKELLMEKKEDDDVNSNEDIWNNSVSDSHHHSQFDEEAPLMYSSRISHLGRKPA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04880 369 PANTHER SOLUTE CARRIER FAMILY 35 9 303 - -
Trre13g04880 369 MobiDBLite consensus disorder prediction 323 354 - -
Trre13g04880 369 Pfam Triose-phosphate Transporter family 10 296 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04880 Trre-Chr13 55250769 55254889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04880 1 366 Organic Solute Cotransporters AT3G17430 74.457 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04880 - - tpra:123891062 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04880 13 55250769 55254889 Trre13g04880 13 55250769 55254889 ECH