Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04860 ATGAGTGATTTGGTGTACAGAATCAGCACATCGAAGGAATGGATGGAATTGCAAAGCAATGGTTCCACTTTCGGTGGTGAACTTGACAAGAATACTGGTTTCATCCATCTTAGCAAACTCGACCAGGTTCGTTCAACGCTGGATAATTTTTTCTTGAACTGTAAAGATGAACTCTACCTGCTTCAGATTGATGCTAAAAAGCTTGGCGATGGTTTGGTGTATGAAACTGTGGACGGTTCAAATAGCTTTCCTCATTTTTATGGGCCATCTCGAAGCTTTATCCCTCTCCCTCTAGATGTGGTCACGAAAGCGGAGAAGATGTCTCTCTCAAATGGTCGGTACAGTTGTAGTTTGCTTGACTAA 363 0.4242 MSDLVYRISTSKEWMELQSNGSTFGGELDKNTGFIHLSKLDQVRSTLDNFFLNCKDELYLLQIDAKKLGDGLVYETVDGSNSFPHFYGPSRSFIPLPLDVVTKAEKMSLSNGRYSCSLLD 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04860 120 SUPERFAMILY ADP-ribosylation 4 112 - -
Trre13g04860 120 Pfam Protein of unknown function (DUF952) 9 102 IPR009297 -
Trre13g04860 120 Gene3D Protein of unknown function DUF952 3 117 - -
Trre13g04860 120 PANTHER BLR1139 PROTEIN 3 119 IPR009297 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04860 Trre-Chr13 55092605 55093997 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04860 - - gmx:100778297 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04860 13 55092605 55093997 Trre13g04860 13 55092605 55093997 ECH