Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04859 ATGGCTTTGATCACCAGTACCAACCTTGCGAGTTTTCAGCTCAAAGAAACCGAAGTTCCTTTCTCGCGTTTCACCTTCATTGACAAGCATTTTGGATATCATCCTCATCGCAACAATGTGGTCCTAAGAAGCAAAGGAAGAAATGCACCGGTTCTTCCTAAAGTCAGAGCTCAAAAGCTTCCTGATTATGTTCCAGAATCCAAGTTTTACAAAATTGAAGCCATTCTAAGACCCTGGAGAATCCCTCATGTTTCTTCGGCTTTGTTGAAGATGGGAATTCGTGGTGTCACTATATCTGATGTCAAAGGGTTTGGTGCTCAGGGCGGTTCTAAAGAGAGGCAGGGAGGCTCTGAGTTTTCTGAAGACAGTTTTGTTGCCAAAGTTAAAATGGAAATAGTGGTGAGGAAAGACCAGGTTGAGGCAGTAATATACAAAATTATGGAGGTGGCAAGGACTGGGGAGATTGGTGATGGCAAAATTTTCTTGATCCCTGTCTCCGATGTAATAAGAATTCGCACAGGTGAGCGTGGGGAGCAGGCTGAGAGGATGGCTGGAGGACTAACTGATTTGTCATCTGTTTGA 582 0.4416 MALITSTNLASFQLKETEVPFSRFTFIDKHFGYHPHRNNVVLRSKGRNAPVLPKVRAQKLPDYVPESKFYKIEAILRPWRIPHVSSALLKMGIRGVTISDVKGFGAQGGSKERQGGSEFSEDSFVAKVKMEIVVRKDQVEAVIYKIMEVARTGEIGDGKIFLIPVSDVIRIRTGERGEQAERMAGGLTDLSSV 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04859 193 SUPERFAMILY GlnB-like 70 180 IPR011322 -
Trre13g04859 193 ProSitePatterns P-II protein C-terminal region signature. 152 165 IPR017918 GO:0006808|GO:0030234
Trre13g04859 193 Gene3D - 58 191 IPR015867 -
Trre13g04859 193 PANTHER NITROGEN REGULATORY PROTEIN P-II 45 192 IPR002187 GO:0006808|GO:0030234
Trre13g04859 193 SMART P_II_3 72 174 IPR002187 GO:0006808|GO:0030234
Trre13g04859 193 Pfam Nitrogen regulatory protein P-II 70 177 IPR002187 GO:0006808|GO:0030234
Trre13g04859 193 ProSiteProfiles P-II protein family profile. 69 181 IPR002187 GO:0006808|GO:0030234
Trre13g04859 193 PRINTS P-II protein signature 91 109 IPR002187 GO:0006808|GO:0030234
Trre13g04859 193 PRINTS P-II protein signature 70 85 IPR002187 GO:0006808|GO:0030234
Trre13g04859 193 PRINTS P-II protein signature 121 144 IPR002187 GO:0006808|GO:0030234
Trre13g04859 193 PRINTS P-II protein signature 152 172 IPR002187 GO:0006808|GO:0030234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04859 Trre-Chr13 55087034 55089595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04859 - - gmx:100499915 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04859 13 55087034 55089595 Trre13g04859 13 55087034 55089595 ECH