Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04819 ATGTCCACCTTGCAGCTTCCCCATATAGCACCTCTCACTGCCGTGTCCACCGAAGACGGCACCGACAACAACACTGTTTCTTCCTCTACCACTGCCGATACTTCCAATGATTACGAAGATGATTCAGAGTTAGGAGAACAGTATCGTGTTCCTCCACCTGAGATTAGGGACATTGTTGATGCTCCACAGGTTCCTGCATTGTCATTTTCACCATACAGAGACAAAATCATTTTCCTCAAGCGACAGTCTTTACCTCCGCTAACTGAATTAGCGAGGCCGGAGGAAAAGTTGGCTGGTTTACGTATTGATGGACAGTGCAATTCAACGAATCGCTTGTCATTCTACACCGGTTTAGGGATCCACCAAATTCTTCCTGATGGTACATTAGGACCAGAGGTTGACATACATGGTTTGCCTGAAGGCGCGAAGATACATTTTGTTATTTGGTCTCCTGATGGTCGACATTTATCCGTTAGTATTCGCGTGAATGTAGCGGACGATAATACCAGTAAATTCAGAGTGTGGATTGTAGATGTGGAAACCGGGAAAGCTAGACCTTTGTTTCAATCTCCTGATTTATATTTAAACGCGGTTTTTGACAACTATATTTGGATAGATAACTCTACATTGTTAGTTTGCACCATTCCATCAACCCGTGGAGCTCCACCAAAGAAACCTTTGGTTCCTAGTGGCCCAAAAATTCAATCTAATGAGCAGGAAAACATTATTCAAGCAAGAACATTCCAGGATTTGCTGAAGGATGAATACGATGAAGATTTGTTTGACTACTATGCGACCTCTCGGCTTGTTTTAGCATCTTTGGATGGTACTACAAAGGATTTTGGACCACCGGCTGTTTATACCTCTATCGATCCTTCCCCGGATAAGAAGTACGTTATGATTAGTTCAATACATAGGCCTTACTCTTTTATTGTACCTTGTGGAAGATTTCCAACGAAGGTACAGTTGTGGAGTGCCGATGGAAAATTTGTCAGGGAGCTTTGTGACTTGCCCCTTGCCGAAGACATTCCAATTACATCCGATAGTGTGCGAAAAGGGATGCGTTCTATTGACTGGAGAGCTGATAAGCCATCAACACTTTACTGGGTAGAAACTCAAGATGGAGGTGATGCAAAAGTGGAAGTTTCTCCTCGTGATATAATATTCTCACAACCTGCTGAACCACTAGAAGGTGAACAGCCAGTGATATTACAGAAGCTTAATCTCCGCTACGGAGGAATTTATTGGTGCGATGATTCGCTGGCTTTTGTACATGAATCTTGGTATAAAACAAGGCGAATAAGAACATGGGCAGTCTCTCCTGGATCTGAAGATATGCCTGCACGCATACTATTTGATCGATCTTCGGAAGATGTATACTCTGATCCCGGCTCTCCCATGTTGCGGAGAACCCAAGTTGGGACATATATTATTGCCAAGGTAAAGAAAAGGGGTAATGACGGAAGTTATATCTTACTGAATGGAAGTGGTGCAACACCGGAAGGGAACGTTCCATTCCTTGATCTGTTTGACCTAAATACAGGTAATAAGGAACGAATCTGGGAGAGCGATAAGGAAAAGTATTTTGAGACTGTTGTTGCGCTAATGTCTGATCAAGAAGAAGGAGATTTACAGTTAAATAGGCTGAAAATACTGACTTCACAAGAGTCAAAAACAGAAAACACTCAATATAACTTTGTTAGCTGGCCGGATAAAAAAATAGTTCAGGTTACAAATTTTCCTCATCCATACCCTCAGCTTGCTTCATTGCAGAAAGAGATGATCAGGTATCAAAGAAAAGACGGGGTTCAGCTTACTGCCACATTATACTTGCCACCGGGTTACAATCCATCAACAGATGGTCCTTTGCCATGTTTCATTTGGTCTTATCCTGGAGAATTTAAGAGCAAAGATGCTGCTAGCCAAGTTCGTGGTTCTCCAAATGAATTTACTGGGATCGCTTTGATGATATCCCATCTTTGGCTGGCTAAAAGGTTTGCAATTTTAGCTGAACCATCCATTCCTATTATCGGCGAGGGAGAAGCAGAGGCTAATGATAGCTATGTAGAGCAATTAGTTGCAAGTGCAGAAGCTGCTGTGGAGGAAGTTATCCGGCGTGGGGTAGCTCATCCAAAGAAAATAGCTGTTGGTGGACATTCCTATGGTGCATTCATGACTGCCAACCTTCTAGCACATGCCCCTCATCTTTTCAGTTGTGGAATTGCTCGTTCTGGTGCTTACAACAGAACGCTTACTCCTTTCAGTTTTCAGAATGAAGACAGAACTCTTTGGGAGGCCACTAATACCTATATAGAGATGAGTCCTTTCATGTCAGCTAACAAAATTAAGAAGCCTATTTTGCTTATCCATGGGGAAGATGATAATAATTCAGGAACATTAACCATGCAGTCAGATAGGTTTTTCGATGCTCTGAAAGGTCACGGTGCTCTTTGTCGGCTGGTGATTCTTCCATTTGAAAGCCATGTTTATTCGGCCAGAGAAAGTATCATGCATCTCCTTTGGGAAACAGGTAGATGGCTGCATAAATATTGTGTGTCAAATACTTCTGATGCTGGTGGGTGA 2583 0.4262 MSTLQLPHIAPLTAVSTEDGTDNNTVSSSTTADTSNDYEDDSELGEQYRVPPPEIRDIVDAPQVPALSFSPYRDKIIFLKRQSLPPLTELARPEEKLAGLRIDGQCNSTNRLSFYTGLGIHQILPDGTLGPEVDIHGLPEGAKIHFVIWSPDGRHLSVSIRVNVADDNTSKFRVWIVDVETGKARPLFQSPDLYLNAVFDNYIWIDNSTLLVCTIPSTRGAPPKKPLVPSGPKIQSNEQENIIQARTFQDLLKDEYDEDLFDYYATSRLVLASLDGTTKDFGPPAVYTSIDPSPDKKYVMISSIHRPYSFIVPCGRFPTKVQLWSADGKFVRELCDLPLAEDIPITSDSVRKGMRSIDWRADKPSTLYWVETQDGGDAKVEVSPRDIIFSQPAEPLEGEQPVILQKLNLRYGGIYWCDDSLAFVHESWYKTRRIRTWAVSPGSEDMPARILFDRSSEDVYSDPGSPMLRRTQVGTYIIAKVKKRGNDGSYILLNGSGATPEGNVPFLDLFDLNTGNKERIWESDKEKYFETVVALMSDQEEGDLQLNRLKILTSQESKTENTQYNFVSWPDKKIVQVTNFPHPYPQLASLQKEMIRYQRKDGVQLTATLYLPPGYNPSTDGPLPCFIWSYPGEFKSKDAASQVRGSPNEFTGIALMISHLWLAKRFAILAEPSIPIIGEGEAEANDSYVEQLVASAEAAVEEVIRRGVAHPKKIAVGGHSYGAFMTANLLAHAPHLFSCGIARSGAYNRTLTPFSFQNEDRTLWEATNTYIEMSPFMSANKIKKPILLIHGEDDNNSGTLTMQSDRFFDALKGHGALCRLVILPFESHVYSARESIMHLLWETGRWLHKYCVSNTSDAGG 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04819 860 Pfam Prolyl oligopeptidase family 698 850 IPR001375 GO:0006508|GO:0008236
Trre13g04819 860 SUPERFAMILY DPP6 N-terminal domain-like 140 524 - -
Trre13g04819 860 FunFam probable glutamyl endopeptidase, chloroplastic 584 851 - -
Trre13g04819 860 SUPERFAMILY alpha/beta-Hydrolases 592 850 IPR029058 -
Trre13g04819 860 MobiDBLite consensus disorder prediction 1 57 - -
Trre13g04819 860 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 41 852 - -
Trre13g04819 860 MobiDBLite consensus disorder prediction 1 35 - -
Trre13g04819 860 Gene3D alpha/beta hydrolase 584 851 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04819 Trre-Chr13 54830617 54835080 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04819 - - tpra:123891112 1610.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04819 13 54830617 54835080 Trre13g04819 13 54830617 54835080 ECH