Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04756 ATGATGAACCCTTCCAAACCTCCGCGCCGGAAAGTTACTCAGGCAAACGGCGATGACTCCGGAGACAAACTCGACCAGCTTCTTCTATCATCCGCTATATGCAACAACGAAGACTTAGGCTCCTTCATCCGCAAAGCTTTCGCTTCCGGCAAGCCGGAGACACTCCAACATCACCTCAAACACTTCGCTCGATCCAAAGAATCAGAGATCGAAGAAGTCTGTAAAGCACACTACCAAGACTTCATCCTCGCCGTCGATGATCTCCGATCGCTCCTCTCCGACGTAGAATCTCTCAAGTCATCACTCTCCGATTCCAACTCAAAACTCCAGTCCGTCGCTCGTCCGCTTCTCACCTCCCTCGATTCCTTCGTTGAAACACGAAACGTTTCGAAAAACGTTAATCTCGCCATCGATTCAGTCGAAGCGTGTGTTCAGTTAATGGAAGTTTGTTCACGCGCTAATAGTCATCTTACCGGTGACAATTTCTACATGGCGTTGAAGTGTGTTGATGCAATCGAGAGAGATTACTTGGATAAAACGCAGTCGTCAACGTTGAAGAAGATGCTTGAGAAGAAGATTCCAGAGATTCGTTCTTACATAGAGAGAAAAGTAAACAAAGAGTTCGGTGATTGGTTAGTTGAGATCCGTGTTGTGAGTCGCAATTTAGGTCAATTGGCAATTGGTCAAGCTTCATCGGCGAGACAGAGAGAAGAAGATCTTAGAATCAAACAGCGTCAAGCGGAGGAACAGAGTAGACTCAGTGTTAGGGATTGTATTTATGCTTTGGAGGAAGAAGATGAAGATGGAATTGTTGCTGGGATCGGAGATGACGGTTACAGTAATGGTAATGGCGGTGGAAGTTTGGGATTTGATTTGACTCCATTGTATAGAGCGTACCATATTCACCAAACGTTAGGATTAGAGGATGGATTTAAGCATTATTATTTTGAGAATCGGAAACTTCAGTTGACTTCGGATTTTCAGGTATCGTCTATGACGCCTTTTCTTGAATCGCATCAAACGTTCTTTGCGCAGATTGCAGGTTTTTTTGTGGTGGAGGATCGTGTGTTGAGAACCGGTGGTGGTTTGATATCGAAAATGGAAGTTGAGAATTTGTGGGAAATTGCTGTTAGCAAAATGTGTTCTGTGTTGGAGGATCAATTTTCTAGAATGCAAACTGCTAATCATCTTTTGTTGATTAAGGATTATGTGAGTTTATTAGGAGTAACATTGCGTCGATTTGGTTATCCGATTGATGCGTTGCTTGATGTTTTAAGCAAACATAGGGATAAGTATCATGAATTGCTCTTGTCAGATTGTAGGAAGCAGATAGCTGAGGCAATAGGCGGTGATAAATTCGAGCAGATGTATATGAAGAAAGAGTATGAGTATTCCATGAATGTGCTTTCTTTTCAGATTCAAACAACGGATATTATACCCGCTTTTCCTTACGTGGCACCGTTTTCATCCACGGTGCCTGATTGTTGTCGTATTGTGCGGTCATTTATTGAGGATTCGGTTAGTTTCATGTCACATGGCGGGCAGCTTGAGTTTTATGATGTTGTTAAGAAATATTTAGATAAGCTTTTGAGTGAGGTTTTAGATGAAGCTTTGTTAAAGCTTATTAATACCTCGGTTAGTGGTGTCTCCCAGGCAATGCAAATGGCAGCAAATATGGCTGTTCTGGAGCGCGCGTGTGATTTTTTCTTTCGACATGCGGCGCAGCTTTCAGGTGTTCCTCTGAGAATGGTGGAGAGAAGCCGGAGGCAGTTCCCTCTTAGGAAAGCTCGTGATGCTGCGGAAGAGACACTTTCTGGGCTGCTCAAAGCCAAAGTTGATGGATTTATGACATTGATTGAAAATGTAAATTGGATGACTGATGATCCGCCTCAAGATGGAAATGAATATGTAAATGAGGTCATAATGTATTTAGAAACTGTGGTTTCAACTACTGCATCACAAATATTGCCAACTCAAGTCCTTAAAAGAGTTCTACTGGATGTTATTTCTCATATATCGGAGATGATAGTTGGGACTTTAGTTAGTGATTCTGTTAAGAGGTTTAGTGTCGGTGCTATAACTGGAATTGATACAGACATCAAGCTCTTAGAATCATTTGCTGAATCTCAGGCAACCCATTTATCCGATGGGGATGCTGATCAGTTGAAATTGGCACTTGCTGAGTCGAGGCAAATGGTTAATTTGCTAGTAAGCAATCATCCCGAGAATTTCCTGAATCCAGTGATCAGGGAGAGGAGTTACAATGCTTTGGATCACAAGAAAGTGGTGATTGTTTCAGAAAAGTTGAAGGATCCTTCAGATCGACTCTTTGGAACCTTCGGCAGTCGAGGGTCCAGGCAGAATCCAAAAAAGAAATCTCTGGATACATTGATAAAAAGACTAAGGGATGTTAGCTGA 2418 0.4247 MMNPSKPPRRKVTQANGDDSGDKLDQLLLSSAICNNEDLGSFIRKAFASGKPETLQHHLKHFARSKESEIEEVCKAHYQDFILAVDDLRSLLSDVESLKSSLSDSNSKLQSVARPLLTSLDSFVETRNVSKNVNLAIDSVEACVQLMEVCSRANSHLTGDNFYMALKCVDAIERDYLDKTQSSTLKKMLEKKIPEIRSYIERKVNKEFGDWLVEIRVVSRNLGQLAIGQASSARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEDEDGIVAGIGDDGYSNGNGGGSLGFDLTPLYRAYHIHQTLGLEDGFKHYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVLRTGGGLISKMEVENLWEIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRFGYPIDALLDVLSKHRDKYHELLLSDCRKQIAEAIGGDKFEQMYMKKEYEYSMNVLSFQIQTTDIIPAFPYVAPFSSTVPDCCRIVRSFIEDSVSFMSHGGQLEFYDVVKKYLDKLLSEVLDEALLKLINTSVSGVSQAMQMAANMAVLERACDFFFRHAAQLSGVPLRMVERSRRQFPLRKARDAAEETLSGLLKAKVDGFMTLIENVNWMTDDPPQDGNEYVNEVIMYLETVVSTTASQILPTQVLKRVLLDVISHISEMIVGTLVSDSVKRFSVGAITGIDTDIKLLESFAESQATHLSDGDADQLKLALAESRQMVNLLVSNHPENFLNPVIRERSYNALDHKKVVIVSEKLKDPSDRLFGTFGSRGSRQNPKKKSLDTLIKRLRDVS 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04756 805 FunFam Exocyst complex component 596 744 - -
Trre13g04756 805 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 596 744 IPR042044 -
Trre13g04756 805 Gene3D - 418 590 IPR042045 -
Trre13g04756 805 Pfam Exocyst complex subunit Sec15-like 464 769 IPR046361 -
Trre13g04756 805 PIRSF Sec15 3 805 IPR007225 GO:0006886|GO:0090522
Trre13g04756 805 PANTHER SEC15 9 803 IPR007225 GO:0006886|GO:0090522
Trre13g04756 805 MobiDBLite consensus disorder prediction 1 22 - -
Trre13g04756 805 Coils Coil 230 250 - -
Trre13g04756 805 FunFam Exocyst complex component 418 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04756 Trre-Chr13 54329121 54331538 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04756 K19985 - gmx:100796432 1353.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04756 13 54329121 54331538 Trre13g04756 13 54329121 54331538 ECH