Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04747 ATGGCAGAGAAGAAACGAAAGGAGAGAGGCGACGCCAACCGCAACCGCACCACCGGAAGAAAGAAATCGAAGAAGGATACAGGACGCAAGAAAACCGGTCCCCATTTGCCTTCATCATTGAAAAAAGAAATCGAACGCTTAAACCCTAACCCTATCGATGTCGATGAAGTCGATAGTGACATATACGAATACGAAGAAGAACAACCTGAAGAAGAATCAAGGAAGAATAAGCGATACGATCCTGTAGCTGTCAATGATGACCCTAATTTTTCTTCTGATTTCGAGGACGAGAATGTTCAATCTGACGATGAAAATGATGACGAAATCGATACTATTTTCGAAGGAATTACCGATAATAATAATAAGAAGGTGAATGTGAAGAGTGCTGTTATTCCTGAGCTATATCCCGAGTCTGAATACAATCCTAGTCGCGATGTTGTGGAAGGTGATGGACGTGTTAGCATTGAGGATCTTCTTAATCCTCTTAGTGAAGAACCTGAATTTGCAAATCTTCGGAAGAGAAATGCACTAATTGAGAAGCATGCTAGAACTGTTCATGCACCACTTCCGACAGCAGATCAAGCGAAGGTAGATAGGAAGGTAGCATATGAAATAACAAAGAAAGAAGTCACAAAGTGGCAACCTATTATTCAGAGAAACAGAGAGGCACCTACTTTATTCTTTGATGAAAAGACAGATCTTGGGTTTTCAACTATTGGAGCAATAGCTTCCGAATTTGAACCCAGGACTGAATTTGAGAAGAAAATGGCTGCACTGGTTAATGTTGACAAACTTAAGGAAGCTCATAACAAGGATGGTTCTAGGCTTCTTGAATTAAACAAGGTTTCTATCGAAGATGAGAAGGATAGGCAAAACCGGATGGCTAAAATGCGAAGCCTTCTTTTTCGTTCTGAAATGAAGAAAAAACACGCGAATAAGATAAAGTCCAGAACATTTCGTCGTTTGAATAAGAAAGATAGATTGAAGGTAGAGTTTTCTCAATTGCAAATGGATCCTGAAGCTGCTAATGAATATGCTTTGAAACGAGAACGCCAGAGGGTGGAGGAACGCATGACTCTGAGACACAAACAAAACACTCCTTGGCTTCAACGTAAAAAGCAACGTGGTTTAGATAAGCAGGATGAAGGAACTCGTGCTGCCGTGATTGAACATTTTCAAAGACATGATGAACTGACTAGAAAAATCAATACTATGGACAGTAGCAGCAGCAGTGATGATAGCAGTTATGAAGATGATGATGATATTACCGCTGATTCTGATCCGGATAAGGATAACAAGATTTTGCAAAAAGCAAAACAAAAGACACTAGAAGTTTTGGGGGAAGACGACGAAATTCCCAATTCAGGATTGCTATCTTTACCTTTTATGAGGCGTGGATTGGAGAAAAGAAAAGAGGCAACTATTGATGAAGTCAACCTAACTCTTCATGAATTTGAAGATTCCATGAAGAAGCTGGAGGATTCTGCTGGTTCAGAAGATCCAAAAGTAGCATCTACCAGTGGCAGAAGAGTATTTGGAATGGCTAAAGCCCAGATAATTGATGCTGGTAGTAAGTTGAAATTAGATAAATTTTACGATAACAGCGACAGTGAGGATGAATTGGAAGACAGCAAAAATGGCAACAATGAGAATGAGAAGGATGTCATCAATGATTCAGTCTTAAATCAAGAGGTTTTAGATACCCGCAAACAATCTGTTTTTAAGAGCTTTGATGAAGTTGTAAAAAACCCTGGGCCAAAAACTACGTATGAAGTTTCCTTATTTGCCTCAAATACTTGGAAAAAGGCAAAAAACACAAATAGGATGGACACAGACATCAAGAAGTCTGCAAATTTTACAGGGCCTGTTAGGCACAATTTAAAGAACACTGAAAACGATCAAATGGGAGAACATAGCGATACGGATGATGAAGGACAGATGGTGGATGGAATTCTGACTTCTGCATCTAAACCATCTTATGAACTTCCACCTCAAGAGGAGCTCATTAGACAAGTATTTGCTGGGGATGATGTAGAAGGTGATTTTGAAAAGGATAAGCAGGCGGTCCTCAATGAAGAAAATCCTGAGCCAGAAAAGCCCCCATTACTTCCTGGCTGGGGAAACTGGACTAATGTACAGCGTAAGATAGGTTTACCATCCGAGATGGTGAAAAAACATGAAAATGCCCAGAGAAAAAGGGAAGACAGTCTCAATAGGAGAAGGGATGCTCATCTTAGACATGTGATATACTCTGAGAAACCAAGCAAGAAGGCTGAGAAACTCTTTACAAAAACCCTGCCCTTTCCTTACACTTCCCCTGAGATGTTTGATCAGAATAATCGTGCTCCCCTTGGACCTGAGTTTAACCCAACAACTACAAATGGAGATCTTATTCGGCCTGAAATGGTGAAGAAACCAGGTCTTATTATAAAACCAGTAGAGTTTGAGGAAGTGAATCCACATGGTAAACCAATGCAACGAAGTGTTAAGCACAAGTTGAAGAAAACCAAAGGCAGTGATAGCTTAGCCGTAAAAAAATCGAAGTTCAAGGGAAAAAGATCAGTGGGACAGTGA 2574 0.4017 MAEKKRKERGDANRNRTTGRKKSKKDTGRKKTGPHLPSSLKKEIERLNPNPIDVDEVDSDIYEYEEEQPEEESRKNKRYDPVAVNDDPNFSSDFEDENVQSDDENDDEIDTIFEGITDNNNKKVNVKSAVIPELYPESEYNPSRDVVEGDGRVSIEDLLNPLSEEPEFANLRKRNALIEKHARTVHAPLPTADQAKVDRKVAYEITKKEVTKWQPIIQRNREAPTLFFDEKTDLGFSTIGAIASEFEPRTEFEKKMAALVNVDKLKEAHNKDGSRLLELNKVSIEDEKDRQNRMAKMRSLLFRSEMKKKHANKIKSRTFRRLNKKDRLKVEFSQLQMDPEAANEYALKRERQRVEERMTLRHKQNTPWLQRKKQRGLDKQDEGTRAAVIEHFQRHDELTRKINTMDSSSSSDDSSYEDDDDITADSDPDKDNKILQKAKQKTLEVLGEDDEIPNSGLLSLPFMRRGLEKRKEATIDEVNLTLHEFEDSMKKLEDSAGSEDPKVASTSGRRVFGMAKAQIIDAGSKLKLDKFYDNSDSEDELEDSKNGNNENEKDVINDSVLNQEVLDTRKQSVFKSFDEVVKNPGPKTTYEVSLFASNTWKKAKNTNRMDTDIKKSANFTGPVRHNLKNTENDQMGEHSDTDDEGQMVDGILTSASKPSYELPPQEELIRQVFAGDDVEGDFEKDKQAVLNEENPEPEKPPLLPGWGNWTNVQRKIGLPSEMVKKHENAQRKREDSLNRRRDAHLRHVIYSEKPSKKAEKLFTKTLPFPYTSPEMFDQNNRAPLGPEFNPTTTNGDLIRPEMVKKPGLIIKPVEFEEVNPHGKPMQRSVKHKLKKTKGSDSLAVKKSKFKGKRSVGQ 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04747 857 Coils Coil 475 495 - -
Trre13g04747 857 MobiDBLite consensus disorder prediction 1 106 - -
Trre13g04747 857 MobiDBLite consensus disorder prediction 818 857 - -
Trre13g04747 857 MobiDBLite consensus disorder prediction 630 645 - -
Trre13g04747 857 MobiDBLite consensus disorder prediction 1 17 - -
Trre13g04747 857 MobiDBLite consensus disorder prediction 90 106 - -
Trre13g04747 857 MobiDBLite consensus disorder prediction 616 645 - -
Trre13g04747 857 PANTHER U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 2 836 IPR006709 GO:0006364|GO:0032040
Trre13g04747 857 MobiDBLite consensus disorder prediction 30 53 - -
Trre13g04747 857 Pfam Utp14 protein 122 815 - -
Trre13g04747 857 MobiDBLite consensus disorder prediction 399 434 - -
Trre13g04747 857 MobiDBLite consensus disorder prediction 535 559 - -
Trre13g04747 857 MobiDBLite consensus disorder prediction 357 383 - -
Trre13g04747 857 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04747 Trre-Chr13 54278274 54283485 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04747 K14567 - gmx:100784007 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04747 13 54278274 54283485 Trre13g04747 13 54278274 54283485 ECH