Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04744 ATGGATTTAGAGTTGCAATATCAAGAAGAGTTCTGGAGAAACTCAAGGGGAGTGCAACTTTTCACTTGCAAATGGTTGCCATTATCTTCTCCAAAGGCACTAGTTTTTCTTTGCCATGGCTATGGCATGGAATGCAGTCGTTTCATGAGAGAATGTGGAGTACGGCTAGCTTGTGCCAAATATGCTGTGTATGGTATTGATTATGAAGGACATGGTCGTTCCGAAGGCGTTCGATGTTACATTAAGAAGTTCAGTAACATTGTTAATGACTGTTATGACTTTTTCAAGTCAGTTAGTGTGCTTCAAGAGTATAAGGGAATGGCTAGGTTCTTGTATGGAGAGTCCATGGGTGGAGCAGTTAGTCTACTTTTGCATCAAAAAGACCCTTCTTTTTGGGACGGCGCCGTTCTTGTCGCACCCATGTGTAAGATATCAGAGAAGGTGAAGCCACACCAAATTGTCATCAACATACTGACTAAAGTAGAAGATATCATACCAAAGTGGAAGATTGTTCCCACAAAGGATGTCATCAATTTAGCCTTCAAAGATCCAGCCAAAAGAGAAAGGATAAGGAAAAACAAGTTGATATACCAGGACAAGCCCAGGTTAAAAACAGCACTAGAAATGTTAAGAACCAGCATGAATCTTGAAGACACCTTATACAAGGTAACCCTACCATTTTTTGTAATGCATGGAGAAACAGATACAGTGACAGATCCAGAAGTAAGCAGAGCATTATATGAGAGAGCTAGTAGCAAAGACAAGACAATTAAATTGTATCCTGGTATGTGGCATGGTTTAACATCTGGTGAGCCTGATGACAACATTGAAAAAGTCTTTGAAGACATCATAACATGGCTTGACAAACACGCCAACAATAATGCTGCTTATGAGACTTCACACACAACTGAGACCTGTGACATTCAGAATTTGACACCAGTTGTATCATCAACAAAGACTTTGAAGCAGACACAAATGCGAAAATTCTATCTTTGTGGGTTGAGAGGAAGTCGTTCGTTACATCACTCAGCAACTTAG 1038 0.4017 MDLELQYQEEFWRNSRGVQLFTCKWLPLSSPKALVFLCHGYGMECSRFMRECGVRLACAKYAVYGIDYEGHGRSEGVRCYIKKFSNIVNDCYDFFKSVSVLQEYKGMARFLYGESMGGAVSLLLHQKDPSFWDGAVLVAPMCKISEKVKPHQIVINILTKVEDIIPKWKIVPTKDVINLAFKDPAKRERIRKNKLIYQDKPRLKTALEMLRTSMNLEDTLYKVTLPFFVMHGETDTVTDPEVSRALYERASSKDKTIKLYPGMWHGLTSGEPDDNIEKVFEDIITWLDKHANNNAAYETSHTTETCDIQNLTPVVSSTKTLKQTQMRKFYLCGLRGSRSLHHSAT 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04744 345 Gene3D alpha/beta hydrolase 4 298 IPR029058 -
Trre13g04744 345 PRINTS Alpha/beta hydrolase fold signature 60 75 IPR000073 -
Trre13g04744 345 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Trre13g04744 345 PRINTS Alpha/beta hydrolase fold signature 227 241 IPR000073 -
Trre13g04744 345 SUPERFAMILY alpha/beta-Hydrolases 6 291 IPR029058 -
Trre13g04744 345 PANTHER PHOSPHOLIPASE-RELATED 11 290 - -
Trre13g04744 345 FunFam Alpha/beta-Hydrolases superfamily protein 2 294 - -
Trre13g04744 345 Pfam Serine aminopeptidase, S33 30 272 IPR022742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04744 Trre-Chr13 54250493 54256193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04744 48 343 Acyl Lipid Metabolism Gene Families AT2G47630 65.333 8.64e-146 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04744 K18368 - jre:108986861 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04744 13 54250493 54256193 Trre13g04744 13 54250493 54256193 ECH