Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04742 ATGGCGTCAGGTTGGGGAATCACAGGAAACAAAGGTCGATGCTATGATTTCTGGATCGATTTCAGCGAGTGTATGTCTACCTGTAGAGAACCCAAAGATTGTGTTCTCCTTCGTGAAGATTACTTCGAGTGCCTCCACCATTCCAAAGAGTTCCAACGAAGAAATCGGATTTACAAGGAGGAGCAACGCAAACTAAGAGCTGCTGCCAGGAAAGGTCAAGATGATGGAGCTGTTACTGAACATCATTAG 249 0.4538 MASGWGITGNKGRCYDFWIDFSECMSTCREPKDCVLLREDYFECLHHSKEFQRRNRIYKEEQRKLRAAARKGQDDGAVTEHH 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04742 82 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 11 52 - -
Trre13g04742 82 Pfam NADH:ubiquinone oxidoreductase, NDUFS5-15kDa 12 65 IPR019342 -
Trre13g04742 82 PANTHER NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 5 1 81 IPR019342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04742 Trre-Chr13 54239643 54242185 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04742 K03938 - gmx:100306303 164.466