Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04737 ATGGCTCAGGTTTCAGAGAAGCAAGTGATGGTTGTTGGGATCGATGACAGTAATTATAGCTCCTATGCTCTTGAATGGACTCTTGATCATTTGGTTACTACACTACCAAATCCAATCTTCAAACTTGTTCTTGTTTATGCAAAACCTTCTGTTAGTTCTACGGTTGGATTCGTCGGCCCCGGAGCTGCTGAGGTGATGCCTATTGTGGATGCTGATTTGAAAAGAACTGCTACTTTAGTTATTGATGAAGCTAAAGAAATCTGCACCAAGAGATCGGTAAAAGACATAGTAGTGGAAGTGGTGGAAGGTGATGCTAGAAATGTTCTCTGTGATGCTGTGGAGAAGCACCATGCTTCAATATTGGTTCTTGGTAGTCATGGTTATGGAGCTATTAAAAGGGCGGTATTAGGTAGTGTAAGTGACTACTGTGCTCATCATGCTCATTGCACTGTGATGATTGTGAAGAAGCCAAAAACCAAACACTGA 486 0.4177 MAQVSEKQVMVVGIDDSNYSSYALEWTLDHLVTTLPNPIFKLVLVYAKPSVSSTVGFVGPGAAEVMPIVDADLKRTATLVIDEAKEICTKRSVKDIVVEVVEGDARNVLCDAVEKHHASILVLGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKTKH 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04737 161 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 5 161 - -
Trre13g04737 161 CDD USP_Like 10 154 - -
Trre13g04737 161 Gene3D HUPs 1 161 IPR014729 -
Trre13g04737 161 Pfam Universal stress protein family 9 155 IPR006016 -
Trre13g04737 161 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 157 - -
Trre13g04737 161 PRINTS Universal stress protein signature 7 25 IPR006015 -
Trre13g04737 161 PRINTS Universal stress protein signature 133 155 IPR006015 -
Trre13g04737 161 PRINTS Universal stress protein signature 115 127 IPR006015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04737 Trre-Chr13 54216254 54217869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04737 - - adu:107492483 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04737 13 54216254 54217869 Trre13g04737 13 54216254 54217869 ECH