Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04725 ATGGCAGCAACTTCTACCACAAACCTCAAACAACGAATCATAACACCTGAAGGACAAACAACTACAACTACAACTACAACAAACAACAAAAATGGATCAACAATTAACCACAAAAGAGACAAAAGAACAGCAATGGCCAAACGTGGTCTTAGATCACTCATAATAGCAGTTTCATTCCCTCTCTCAATAACCCTTTTATCAATTTACATATCATCTTCACTTTCCTTCTCAAACCACAACAACCAAGTCATAACCGCTTCAAAAAAACCATTTTGGTTTCCACCTTCTTGGGCTATACACCTTAGTTTACCTGCTTCAAGCTTCTTCATGGGTCTTTCAGCTTGGATGGTTTGGGCTGATGGTGGATTTCATAGAAATCCAAATGCTTTTTTTCTTTACTTGCTTCAGCTTCTCTTTACTGTTTTGTGGGATCCTTTTGTTTTTGGAGTTGGAGCAACGAGTTTTGGTTTGTTGATTTGTTTTGGAATTTTTGGAAGTATGTTTGGGTGTTTGCGTGTGTTTGAGAAGGTTAATCCTATTGCTAGTACTTTGATAAAGCCTTGTTTGGCTTGGATTGCTTTTCTTTCCATTGTAAATCTTAAGCTAGTTTTTACCTGA 618 0.3722 MAATSTTNLKQRIITPEGQTTTTTTTTNNKNGSTINHKRDKRTAMAKRGLRSLIIAVSFPLSITLLSIYISSSLSFSNHNNQVITASKKPFWFPPSWAIHLSLPASSFFMGLSAWMVWADGGFHRNPNAFFLYLLQLLFTVLWDPFVFGVGATSFGLLICFGIFGSMFGCLRVFEKVNPIASTLIKPCLAWIAFLSIVNLKLVFT 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04725 205 MobiDBLite consensus disorder prediction 1 33 - -
Trre13g04725 205 CDD TSPO_MBR 88 203 IPR004307 GO:0016020
Trre13g04725 205 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 45 203 IPR004307 GO:0016020
Trre13g04725 205 FunFam translocator protein 2 49 205 - -
Trre13g04725 205 Pfam TspO/MBR family 69 203 IPR004307 GO:0016020
Trre13g04725 205 MobiDBLite consensus disorder prediction 1 41 - -
Trre13g04725 205 Gene3D TspO/MBR protein 51 205 IPR038330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04725 Trre-Chr13 54166315 54166932 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04725 K05770 - gmx:100785785 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04725 13 54166315 54166932 Trre13g04725 13 54166315 54166932 ECH