Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04724 ATGGAAATCGGAGGCAGAAGATTGAAAAACGTAGAAACAATGGCCGTCGAATCCGTTACACAATCAGCACCTCCGCCTAGATCAAAACCAAACAACACCTTCATGGAAAACCCCAAAATACCCATAGCAGTTTCTCTTTTCATTGCCGATTCAATCCTCATCTTCCTCATAATCGCATTTGTCCCCTATACAAAAATAGATTGGGATGCTTACATGTCACAGGTTGAAGGTTTTCTAGGAGGTGAGAGAGATTACCGTAATCTAAAGGGTGATACTGGTCCTCTTGTTTACCCTGCTGGTTTTCTCTATATTTACTCTGCATTTCTTTATCTTACTGGAGGACAAGTTTACCCTGCTCAGATTTTGTTTGGAGTTTTGTATATCATTAATCTTGCAATCGTTCTATATATCTATGTCAAAACTGATGTGCTTCCGTGGTGGGCTCTTTGCTTACTTTCTCTGTCAAAACGAGTGCATTCTATCTTCGTCCTGCGTCTTTTTAATGATTGTGTGGCCATGACACTTCTCCATGCTGCATTGCTCTTACTCATGCACCGAAGGTGGAATCTAGGTTTGATTGTGTTTAGCGGGGCTGTTTCGGTAAAGATGAATGTGCTTCTTTATGCTCCACCTTTACTGCTGCTCATGCTAAAGGCTATGGATATCAGCGGTGTGTTATTGGCATTAGCTGGTGCAGCACTGGTTCAGATATTATTGGGGCTTCCTTTCCTAGTTTCACATCCAGTTGCATACATATCAGGAGCCTTCAATCTTGGTCGTGTCTTCATCCATTTCTGGTCAGTTAACTTCAAATTCATCCCTGAACCAGTATTTGTATCCAAGGGATTTGCAATCTTTTTGTTGGCTGCTCACCTCATAACACTTGCTTCATTTGCACATTATAGATGGTGCAAACATGAAGGAGGGCTTCTAAAGTTTCTGCATTCAAGATATGTCTTTATGAGAATGAAGTTTGCACTTTTCTTCTCCTCCTCTTTTCAGAAGTTTGGCAAGAGCACTTCAACATCCACCAAGATCCTCACTAAAGAACATATCGTGACTACTATGTTTGTTGGAAACTTCATTGGCATTGTATGCGCTCGGTCGTTGCATTATCAATTCTATTCATGGTACTTCTATACCTTACCGTACTTGTTGTGGAGAACGCGCTACCCAACATTGGTCCGATTGATACTGTTCGTGGGAGTGGAGCTGTGCTGGAATATATATCCTTCAAACAACATTTCATCAGCTTTACTTCTCTGCATTCACTTAATTATTCTCTGGGGTTTGTGGTCTGCTCCACCAGAGTATCCTTATGCAGAAAAAGAACCATCGTCCCACAAAGATAAATAG 1356 0.413 MEIGGRRLKNVETMAVESVTQSAPPPRSKPNNTFMENPKIPIAVSLFIADSILIFLIIAFVPYTKIDWDAYMSQVEGFLGGERDYRNLKGDTGPLVYPAGFLYIYSAFLYLTGGQVYPAQILFGVLYIINLAIVLYIYVKTDVLPWWALCLLSLSKRVHSIFVLRLFNDCVAMTLLHAALLLLMHRRWNLGLIVFSGAVSVKMNVLLYAPPLLLLMLKAMDISGVLLALAGAALVQILLGLPFLVSHPVAYISGAFNLGRVFIHFWSVNFKFIPEPVFVSKGFAIFLLAAHLITLASFAHYRWCKHEGGLLKFLHSRYVFMRMKFALFFSSSFQKFGKSTSTSTKILTKEHIVTTMFVGNFIGIVCARSLHYQFYSWYFYTLPYLLWRTRYPTLVRLILFVGVELCWNIYPSNNISSALLLCIHLIILWGLWSAPPEYPYAEKEPSSHKDK 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04724 451 PANTHER NOT56 - RELATED 33 434 IPR007873 GO:0000030
Trre13g04724 451 Pfam ALG3 protein 45 417 IPR007873 GO:0000030
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04724 Trre-Chr13 54161172 54165166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04724 27 451 Miscellaneous Gene Families AT2G47760 69.014 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04724 K03845 - gmx:100785253 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04724 13 54161172 54165166 Trre13g04724 13 54161172 54165166 ECH