Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04718 ATGGCTGCAGCCAAGCCACCATCAGATCAACAAGTTCCTCCTGGATCAGAAACTCTCAAGTATCAGACATGGGTTTTGAAAGTCTTGATCCACTGTGATGGCTGCACAAAAAGAGTCAAGAAAATTCTTCAGGGAATTGAAGGGGTATACACAACAGAAATTGATTCTCGGGCGCACAAGGTTACCGTTACAGGTAATGTTGCGGCCGAGACTCTCATCAAGAAGCTTTCAAGATCAGGGAAATCAGTAGAACTTTGGCCAGAAAAGCCTCCTGAGAAGAAAGATAATAAGAAAGATAAAAAGTCTTCAAAATCAAAAGATGAAACTGAAAATACTACTAATAAGGAGAAAGCAGGTCAAAAAACTACTGAACCAGTTGGTGAAATTTGTCATGATGATCAAGGTTGTATGGATGATGCATGTGATGATGGTGAAGAAGATTCAGATCATAAAGAAGGTAATAATAATAGTAATGGAAATGGTGATAGTAATAAAAGTGAAGGGGGTGCTAAAAAGAAGAAGAAAAAGAAAAAGAAGAACAAAAGTGGTTCTTCTGTTCCTCCTAATAATGGTGATAAAGAAAAGGAAATTATTGGTACAGAAACAATTGATGCAGCAGTTGCTATTCCCAAGGAAATTATTATTCCTCCACAGCCTCAAGTACTTCAGCAGCATGGTTATAACCCATATCAACCACATATGTACTATTCACACCCTCCTCTCACTCCAGCACCACCACCATATGGTCTCAGCTATAACACATCATATCCTGTTTCTACTACTTCTTCATATTATATTGGTGCTCCTGTGATGCCTATGCATGCTAATTATGCTAGACTCCCTCCACCTCCTCTACCATCTCATCCAATCAATAACTATGGTCATCATAATGATCATGAAGAATATGAAGGTGGATATTGCTCCATTATGTGA 933 0.3859 MAAAKPPSDQQVPPGSETLKYQTWVLKVLIHCDGCTKRVKKILQGIEGVYTTEIDSRAHKVTVTGNVAAETLIKKLSRSGKSVELWPEKPPEKKDNKKDKKSSKSKDETENTTNKEKAGQKTTEPVGEICHDDQGCMDDACDDGEEDSDHKEGNNNSNGNGDSNKSEGGAKKKKKKKKKNKSGSSVPPNNGDKEKEIIGTETIDAAVAIPKEIIIPPQPQVLQQHGYNPYQPHMYYSHPPLTPAPPPYGLSYNTSYPVSTTSSYYIGAPVMPMHANYARLPPPPLPSHPINNYGHHNDHEEYEGGYCSIM 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04718 310 SUPERFAMILY HMA, heavy metal-associated domain 21 87 IPR036163 GO:0046872
Trre13g04718 310 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 18 310 - -
Trre13g04718 310 MobiDBLite consensus disorder prediction 81 117 - -
Trre13g04718 310 Pfam Heavy-metal-associated domain 30 81 IPR006121 GO:0046872
Trre13g04718 310 CDD HMA 30 84 IPR006121 GO:0046872
Trre13g04718 310 MobiDBLite consensus disorder prediction 80 197 - -
Trre13g04718 310 Gene3D - 19 85 - -
Trre13g04718 310 ProSiteProfiles Heavy-metal-associated domain profile. 21 84 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04718 Trre-Chr13 54139859 54141285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04718 - - psat:127132690 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04718 13 54139859 54141285 Trre13g04718 13 54139859 54141285 ECH