Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04717 ATGAGGATCGTTGGACTGACTGGTGGAATAGCAAGTGGCAAGAGCACCGTTTCCAATTTATTCAAGTCACATGACATCCCCGTTGTTGACGCTGATGTAGTTGCTCGCGAGGCGTTGAAGAAAGGGAGCGGTGGATGGAAAAAAGTTGTTGCTGCGTTTGGGGAGGAAATTCTACTAGACAATGGTGAAGTTAATAGACCTAGACTGGGCCAAATTGTTTTTGCTGATCCTGATAAGCGTCAATTTCTCAACCGATTGTTGGCACCTTATATATCATCCGGGATCTTTTGGGAAGTTGTGAAGTTATGGTCGAAAGGTTACAAGGTCATTGTTCTCGATATCCCTTTGTTATTTGAGGCCAAGATAGACAAGTTCACGAAGCCCATTATTGTTGTGTGGGTTGATCCTGAAACACAAATTCAAAGACTCTTGGCAAGAGACAAGTCTAGTGAGGAGGATGGTCGGAACAGGGTTAATGCTCAGATGCCGCTGGATACTAAAAAGAGTAAAGCTGATATAGTAATTGACAACACCGGTTCACTAGATGACTTGAATGAACAATTTCAGAAGGTTTTAGTTCGGGTCACTGGACCCTTGACATGGTATGAGTTTTGGCGTTCTAGGCAGGGAGTCTCGATCTTTCTTGCTTCACTTGCCTCAGGTGTTGTTCTCTGTATTAAGGCATTTAACAACAACAATTCATAG 705 0.4326 MRIVGLTGGIASGKSTVSNLFKSHDIPVVDADVVAREALKKGSGGWKKVVAAFGEEILLDNGEVNRPRLGQIVFADPDKRQFLNRLLAPYISSGIFWEVVKLWSKGYKVIVLDIPLLFEAKIDKFTKPIIVVWVDPETQIQRLLARDKSSEEDGRNRVNAQMPLDTKKSKADIVIDNTGSLDDLNEQFQKVLVRVTGPLTWYEFWRSRQGVSIFLASLASGVVLCIKAFNNNNS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04717 234 PANTHER DEPHOSPHO-COA KINASE-RELATED 5 188 - -
Trre13g04717 234 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 191 IPR027417 -
Trre13g04717 234 FunFam Dephospho-CoA kinase CAB5 1 203 - -
Trre13g04717 234 Pfam Dephospho-CoA kinase 3 182 IPR001977 GO:0004140|GO:0005524|GO:0015937
Trre13g04717 234 Hamap Dephospho-CoA kinase [coaE]. 1 198 IPR001977 GO:0004140|GO:0005524|GO:0015937
Trre13g04717 234 NCBIfam dephospho-CoA kinase 3 190 IPR001977 GO:0004140|GO:0005524|GO:0015937
Trre13g04717 234 CDD DPCK 3 183 - -
Trre13g04717 234 Gene3D - 1 199 IPR027417 -
Trre13g04717 234 ProSiteProfiles Dephospho-CoA kinase (DPCK) domain profile. 3 206 IPR001977 GO:0004140|GO:0005524|GO:0015937
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04717 Trre-Chr13 54134692 54135582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04717 K00859 - gmx:100791096 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04717 13 54134692 54135582 Trre13g04717 13 54134692 54135582 ECH