Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04701 ATGAATCCTATTTGTTTTGATGACAACAAACAAGACAATGAAGTGAAATCGGCTGAAGGATTACTTACTTCAGATGTTTCTGGCATGGAAGATGATGAATTTGGAGAACCGGAAGTGGTACCTCGTGTTGGAGATGAGTTCCAGGCAGAACTTCCGCCATTTACTGCAGCACCTTATTTTTCTCAGCTTGTAAAAAGGAAAGGAGATTCAGAAATTGCGGTCGATATGCCAGACTCTTTTTTAGTAGGACTGCCCCTTCCTCTTATGTGGACACATTCTGAATTCGATAGGAGTTGTGGTCGTGAGACTTTAGAATCTGTCACAAGTCAAAAGGGGCGTGGTATTTGTGAAGGGAAAAACATAGGAGGGTTTCCAAATTTTAAATCCTCTTACAGAAATGTCGGGACAGACATTGACTCATGCCCAGAACTGAGAACCGAACTAGATCAGCCAAGAAACAAGTATCTTCTTCCTGAAATGTTGGGTTGTCAGTCTTGGACAGATGTTGAATATAACAGTTTTCTTCTTGGTCTCTATGCATTTGGGAAGAACCTTAATTTTTTGAAGAGATTTGTTGGGACTAAAAGTATGGGAGACATATTGTTTTTCTATTACGGTAAATTTTTTAGGTCTAAAGGATATTCCCGATGGTCAGAATGCCGGAAGTCGAAAACTAGGCGGCGTATATTTGGACAGAAAATATTCACTGGTTGGAGGCAACAAGAATTGCTATCAAGATTATTTTCGTATGTGGCACAGGACCGTAAAACTACTTTGGTTGAGATTTCGAGGAATTTTGGGGAGGGAAAGATGCCATTTGAAGAATACGTATTTGCTCTAAAGGATGCTGTTGGCATTGACTTCCTTATAGCTGCAGTAGCAATTGGCCAAGGGAAGCATGATCTCACAGGCACTGCTCTTGAGCCACCAAAGACGAATCACATATTTTCTGTTCGCCATGAAATACCTGCCGGCAAAGCTTGCTCCTCTCTTGCACCTGCAGATATAATCAAAATTCTAACAGGAGATTTTAGATTAAGTAAAGCTCGATCCAGTGATCTTTTCTGGGAAGCTGTTTGGCCTCGTCTTTTAGCAAATGGTTGGCGGTCTGAAGAGCCAAAGGATAATTATGTTTCTGGAACAAAACAAACTTTGGTTTTTCTTGTACCTGGTGTTAAGAAGTTTTCAAGAAGGAAACTGGAAAAAGGTAAGCAATACTTTGATTCTATAAGTGATGTACTGAATAAAGTGTCATCTAACCCTAAGCTTCTTGAGACTGAAATTCAAGCAACTGAGGGTATTGTAGATAAGGAAAACATGCAAAACAAACAAAACCAAGATGGTGTGTCAAATACACATCAATGTCCTTCGTTTCAATCTCACAATTCAAAGTGCAAACCGGATCCTGTGAAATTTACAATTGTAGATACCAGCATGGTTCATGATACCAATCGACGTAAAGTGAGACAGATGAAAAGCTTACCTTTTCAACCTGCGAATATTTCTACCATCTCAAGCTGCAGTTCTAGCGAATCCGAGACAACTACATCTGAAGAGTCGGAAGATCAAATTGAGGAAGCTAATGCTTCAAGTCCTACTGAAGTTCAGGTTGAACAAGCTAATTCTTTACACCATGCTGAAGATCAGGTTGGACACGCTAATTCTTCATACTGTGTTGAAGATCAGGTTGGACATGCTAATTATTCATACCGTGTTGAAGATCAGGTTGGGCATGCCAATTCTTCACTCCGTGTTGAAGATCAGGTTGGGCATGCTAACTCTTCACACCGTGTTGAAGATCAGGTTGCTCATGCTAATTCTTCAGACCATGTTGAAGATCAGGTTGTGCATGCTAATTCTTCAGACTGTGTTGAAGATCAGGTTGGACACGCGAATTATTCATACCGTGTTGAAGATCAGATTGATCATGCTAATTCTTCAGACCGTGTTGAAGACCAGGTTGTGTATGCTAATTCTTCAGACCGTGTTGAAGATCAGGTTGACCATCGTAATTCTTCAGACCATGTTGATCATCAGGTTGAGCATGCTAATTCTTCATGCTGTGTTGAAGATCAGGTTGAACATGCTAATTCTTCATACCCTGTTGTAGATCGGGTTGAGCAAGCTAATGCTTCAAGTCCTATTGAAGATCAGGCTGAACGTACTAATTCATCATACCATGTTGAGCATGCTAATTCCTACAACCATGTTGAAGAAATCTCAGATAAGGGGATGCACATAGACTCGTCAAGTCATGCTCATAATCTTGAGACCCTCAACACCACGGAAGTAGAAGTAGAAAATTATAAATGCCATTCTGATCTGCCTGATGAGGAGCATTCAAAGGAGTTGAATGAGCAGCCATTGATTCAAAAGATGACATCTGATGATTGCACAAAACCTTTTCCCTGCACTTCAAAAATGCAGGAGTTAAGAGCTTGTAGCCATGGAGAGTTTAGCCTTAGTGCTGAAAATACTTCTATGGACAGAAATTTTGATTTAAATGAGCCATTTTCACCGACAAATCCACATGAAGCATCTGAGGGCATGGATTTTTCTGTAGGTTTAGAAACTCCGTCTTTCCCAAGTTATCCGGCTAAAGGTAGTCCGAATATGAGCCATGAAGGCAGTGTCACTGAGAATCACCAGGCTGGAGAAGTTTCTGCAAAAAATTCTGAAACCAGGATGTTGATCGACTTGAATTTTCCTCAAGTTGCACCTGACTTATCACTTGAAGTGGAAATACCATCCTCTAAGGGAATAAACCTAAACGATGACCAATGGACGCATACATTGTCATCTTCATCTGAGACAACCCAGCTCAACATGATACCAGAGATTCCTGATTTAAATAAGGAGCACCAACCAAGCTTTGTTAACCGCCGTCAAAGTACAAGGAACCGGCCATTAACCACAAAGGCATTGGAAGCTCTTGAGTATGGATTTCTCAACTCAAAGAGGAAGAGGAAGAACACAGAATCTTCAGACAATAATTCAAAGTCCCAATGTTTACGTCCAAGTAACGAGATAATTATCGATGCTACTTATGATCATAGCATTGGGAACTCTATGGCTGATACAAGTGCAAAGGAGGAGATTGTTATCAAGGAATATAGTTTCATTGTTTAG 3129 0.4046 MNPICFDDNKQDNEVKSAEGLLTSDVSGMEDDEFGEPEVVPRVGDEFQAELPPFTAAPYFSQLVKRKGDSEIAVDMPDSFLVGLPLPLMWTHSEFDRSCGRETLESVTSQKGRGICEGKNIGGFPNFKSSYRNVGTDIDSCPELRTELDQPRNKYLLPEMLGCQSWTDVEYNSFLLGLYAFGKNLNFLKRFVGTKSMGDILFFYYGKFFRSKGYSRWSECRKSKTRRRIFGQKIFTGWRQQELLSRLFSYVAQDRKTTLVEISRNFGEGKMPFEEYVFALKDAVGIDFLIAAVAIGQGKHDLTGTALEPPKTNHIFSVRHEIPAGKACSSLAPADIIKILTGDFRLSKARSSDLFWEAVWPRLLANGWRSEEPKDNYVSGTKQTLVFLVPGVKKFSRRKLEKGKQYFDSISDVLNKVSSNPKLLETEIQATEGIVDKENMQNKQNQDGVSNTHQCPSFQSHNSKCKPDPVKFTIVDTSMVHDTNRRKVRQMKSLPFQPANISTISSCSSSESETTTSEESEDQIEEANASSPTEVQVEQANSLHHAEDQVGHANSSYCVEDQVGHANYSYRVEDQVGHANSSLRVEDQVGHANSSHRVEDQVAHANSSDHVEDQVVHANSSDCVEDQVGHANYSYRVEDQIDHANSSDRVEDQVVYANSSDRVEDQVDHRNSSDHVDHQVEHANSSCCVEDQVEHANSSYPVVDRVEQANASSPIEDQAERTNSSYHVEHANSYNHVEEISDKGMHIDSSSHAHNLETLNTTEVEVENYKCHSDLPDEEHSKELNEQPLIQKMTSDDCTKPFPCTSKMQELRACSHGEFSLSAENTSMDRNFDLNEPFSPTNPHEASEGMDFSVGLETPSFPSYPAKGSPNMSHEGSVTENHQAGEVSAKNSETRMLIDLNFPQVAPDLSLEVEIPSSKGINLNDDQWTHTLSSSSETTQLNMIPEIPDLNKEHQPSFVNRRQSTRNRPLTTKALEALEYGFLNSKRKRKNTESSDNNSKSQCLRPSNEIIIDATYDHSIGNSMADTSAKEEIVIKEYSFIV 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04701 1042 MobiDBLite consensus disorder prediction 437 463 - -
Trre13g04701 1042 MobiDBLite consensus disorder prediction 483 544 - -
Trre13g04701 1042 PANTHER ATROPHIN-RELATED 11 988 - -
Trre13g04701 1042 MobiDBLite consensus disorder prediction 495 514 - -
Trre13g04701 1042 MobiDBLite consensus disorder prediction 526 543 - -
Trre13g04701 1042 ProSiteProfiles SANT domain profile. 161 212 IPR017884 -
Trre13g04701 1042 MobiDBLite consensus disorder prediction 590 608 - -
Trre13g04701 1042 SUPERFAMILY Homeodomain-like 165 212 IPR009057 -
Trre13g04701 1042 MobiDBLite consensus disorder prediction 587 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04701 Trre-Chr13 54059776 54064129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04701 - - tpra:123888909 1486.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04701 13 54059776 54064129 Trre13g04701 13 54059776 54064129 ECH