Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04695 ATGGATCGAAGTTGGAGTTGGATTTGGAATAAGGTTTCTCAATGTGAAGATAGAGATGAAATAAAGGGATTAGGGTTAGGGTTAGGGTTGAGTAGTAGAAGGAAAGAGATGTTGGAGGTTGAGCTTGAAGAAGGTGAAGCTTGTTCATATCAAAACCGTGAAGATTATGATGCCACTGTTGATCCAGATGTTGCCCTTTCTTACATTGACGACAAAATTCAAGATGTCCTTGGACATTTTCAAAAAGATTTTGAAGGCGGCGTGTCTGCAGAGAATCTGGGGGCAAAATTTGGTGGTTATGGTTCGTTTTTGCCTACCTATCAGCGTTCTCCTGCTTGGACTCATCCAAGGACTCCACAAAAAAATCATAGTCAAAATTCACCCAGATCTCCTAATAACATGCACTTAGAGAGTGGACAAGGGGATGGTGTACAATGTTCGACTGGAAATCAATTATCGAGACTTGGCCCAGGTTCTGCTACCTCCTCGAGGCTGGCTGCAATTAAGGGACTCTCTTTAGATGATGGAACCAATCACGAAAATTCCATGTCAATCACTAATGCCGAGGCATTAAATTCTAAATATGAGTCACTAAACAGGAAAGCTGCTATCATATCAGACCAGAAGACATTGAAGGTTCGTATCAAAATGGGTCCTGACGATTTGTTAACGCGGAAAAATGCAGCAATATACAGTGGACTTGGTCTAGATGTGTCACCATCATCATCACTGGATGACAGCCCCTCTGAAAGTGAAGGAATTTCTCGTGGTCCTCTGGATGCTCCCTTTGAATCTCCGACCAGTATCCTTAAGATTATATCAACCCTCCCTAAGCTGTTGTCGCCTCTTCCTGATGATCTCACTGAATTAACTGAGAAGGAAGTGCGAACCAGAGATTGCATCCCCGGTCCTGTTCGTACGGATGGCCCAGAAAGTTCCGGTATGTTACTAAATGAATCTAATATTGCAAAAGGTGACAGAAAATTGTTAGGAGGGAAAAAAGTGAAGTCCCTAGAGGGTTACGAGTCCTCGATGGAAGTCAAGGGTTGTAGTAAGAAGAATACTCGTAATGATGTTGGAGGGCTGTCAAAGAAAGAACAATGTGAAGATGTATTGACTATGGAGGAACTAGTTTCAAAAACCATGAAACTTCCACTTTTGTCCAATTCATATTCTCTCGGTGACGACTTGGTAAAGAATGTAGATGGGCCATGTAATAATTCATTAAAGGAAGCCAACAAGGGTGTGGTGAAGGAGAAAACCTCGTCGGACCAAGCACGAAAGGAACAGGTTGATCAAGCATCTGCCGAAGTGAATGGTTTTTCTGAAAGGGCGAAAGGAGGTTCTGGAAGAAAAGCTGTGGGAGATAAGGTTTTGCTCGATGACACAATAGTAGCTGAATCTAATGTTTCCAAAGTTAGGACAGCATCAAGCACTGAATGTATGGAGCCTCCTAAGAAGGCTAATCAGAGAGATAGCTTGGGTGAACAAGACAGTGCGACATTGCCTTTTGTGACAGAACATCCATATCCTGGAGGGAAGAAGAAGTCAAAGGGAATTCATAACACCGTGATTATAGAGAGGGAACAAGAAAATATGAAGTCTGGATCCTCTTTGATTCCCAAAACAAAAAGGGGTTCTGATGATAGTTATACATCAAAAAACGAAATTGAAGATGTCAAACTACGGAAGGGTCCTGGAAAGGCTAGAGAGGCTTATAGGGAATTCTTTGGAGAATTGGAAGATGAGGACGGGATTGATTCACCGGAAACATCTTATGAAGATAAATTGAAGGAATCTGAGGGGGTTGAGAGGAACGCTCCGGAAACAAACCTTGGAGCAAAGGAGACATCGGCTGGTAAGAAAGTTGACAAGTCATTGACAACAGAAGTATACCCTAAAGCAGCTACAAATGTGAACGGAAATGGGGTTCCTGCAATGTTGCCTCATGTTGAGGTGGAAGATAATTGGGTTCAGTGTGACAGATGTCATAAATGGCGTCTTCTTCCTGCTGGCACAAATCCTGATAGCCTACCCGAGAAATGGCTTTGTAGCATGCTTAATTGGCTGCCTGACATGAATCGTTGTAGTTTTAGTGAGGATGAAACTACTAAAGCCCTTTTTTCTTTATACCAAGGGCATCCTCTTGATGCTCAAAGCAACCTGCAAAATGGCTCAGGTAGTGTTATGGTGGGAGGAAATGGCGCAACTTTCCAGCATCCTGGTCAACGCCATCCAAGTAATGATCTGCACGGTGTGCCTGGTGGGAAGAAAAAAGTTGCGAAAGAAATATCAAATTCTTCAAATAAGGATGGCACTTCTCAATTTTCACATCCTATAAAGAAAAACATACAGTCATCAGTGAAAAGCAGGAGCTTAAATGATGTGAACAAATCTCCTGTTGTGGGTGAGGCTGATGCTTCAGGGGAGAAACACAAAAACAAGCCAAGGATGCCGGAGTACAATTCTGATAGAGGTGATACGAAGAATATGAAAAGCAGGAGGGATCCTGATCAAGATTATTCAAGGCCATCCAAGAAAAGTAAGACTGACATGGTTCATTCTGCTGATAAAGATTGGATTCCAGAACAGAATGGAACTGCTAGGAAGGTCAGTCATAGCTCAAACAATGCTTTGCCAACTGCTTCAGCTGGCAAAGATCGGCCTAGACAGAAAGACCACTCCTCATCAAGTGACTCCAAATTCAGAAAGGACAGGCCACCAGTTTCTGCTGAGAAGAGAAAAAGTAAGGGTCGGGATTCCTTGAATGAGGGGTCCCTGGATTTGGAGAATTATGGTTCCATTGGTAGTGTAAAAAAGAGGAAACTGAAGGAGTATCAGGATGCTCAAGCTCATAGTACAGGTAATCCTCGCCTACACGAGAGTAGAATTTCTGAGCAGGAGTTCAGTGATTCCAGGAAGGAAAAGAAAGCAAGAAGTTCAAGATCTGAAGGCAAAGAGTCAAGTGCCAGCAAAGGCAGTGGCAGGACTGACAAAAAGATTAGTCATACAAAGAACCAAAAACTCAGGCAAAATCCTGGAAGCAATCATTCACATCGGAGCACGGATGCCATGGACAGTTCGAAGAGGGACTTGGGATCTGTACAGGTTTCTGTTGCTGCCACTTCAAGCTCTTCTAAGGTCTCTGGCTCACATAAAACCAAAGCCAGCTTCCAGGAAGTGAAAGGCTCCCCTGTGGAATCAGTTTCTTCCTCACCTTTAAGAATTTTAAGTACAGATAAGTTTTCAAACAGAGAAATTATGGTGAAAGATGAGCCTCGCGATACTGCTGCTGTGGATAGTCCAAGAAGATGCTTAGATGGGGAAGATGATGGTGCAAGTGATCGATCAGAAACGGCTAGGAAGGACAAATCTTTCACCATGACCCACAGGTCTGATTTTCAGGGCAAGGATGTTAATCATACCTCAGATACTAAGCCTAAATCCCAAACAACCAGCCATTTTACCAATGGTGGTATGGACACTATGGCCCACAATGTGTCTCATGCAAGGAAAACTGGCACGGAGTCAGGTTTGGAGGAAAACAAGCAGGGCTGCAAGTCTGAGCCCTTTGCAGGAAAAGTCAAGAGTTCTAGTTCTCCTAGTCAACTTCCAGATCAGTCTCCTCTGCGTGAGACAAAACATGTGGATGTAAAAGTTAAGTTGGAGGAGAAGTTTGGGCTCAAGCCTGACCAGAATGAGACTGTACATACTAGCAAAAAAGACATCACAGGAAAAAGTGAAAGTAGGAAAAAAGAGAATCATGTAAAGAGGGAGCATGACGTTCAAGAGGTTAGTGTTGATGCCATAAGCAAAAAGGAACCATTACATGCTCACACTAAGAATCAGTTGGCAGACTGTGATACCGAAAGATCTTCAAAGAGGTCCCTTTCGGAAAGACCTGATCAAGAAGTGCTTGGTAAAGGGAAGTCTCAAGTTGAGACTTTGAATCACTGCCCACGACCAGTCGTTGGTTCCCAAAAAGGGAATGGAGATATGGAAGTTGACCCGTCCAAAGCAGATGAAGCGTCAAAGCTGCAAAAAAAGCAATTCAAAAAGGCTGATCATCAAAATGGAACTCCACAAGTTGGCTCCAGAAACCCTGCACTTAATGGACATAAATCCAAGGAGTTTGAGGCCCCTAGTCCGGCTAGAAAGGATTCTTACAGCCATGCTGCTAACAATGCAGTGAAAGAAGCTAAAGATCTTAAGCACCTGGCTGATCGTCTTAAGAACTCTGGATCCACTCTTGAGAGCACTAGTCTATACTTCCAGGCAGCGCTTAAGTTTCTTCATGGTGCCTCTCTATTGGAATCTGGCAACAATGATAATGCTAAACATAGTGAGATGATTCAATCAAAGCAGATGTACAGTAGCACAGCAAAATTGTGCGAGTTTTGTGCCCATGAATATGAGAAATCAAAAGACATGGCTTCAGCTGCTCTGGCCTACAAATGCACAGAGGTCGCATATATGAGGGTAATATATTCTTCACACACTAGTGCAAGCAGAGATCGGCATGAGTTGCAAACAGCCCTGCAAATGACTCCTCTTGGTGAATCTCCATCATCATCAGCCTCTGATGTTGACAATGTTAACAACTCTACTGCAGCTGACAAAGTTGTCATATCCAAAAGTGTCAATTCACCCCAAGTTGCTGGAAACCATGTTATTGCTGCACGAAGTCGTCCCAATTTTGTGAGGATACTTAATTATGCCCAGGATGTGAATTTTGCCATGGAAGCCTCGAGGAAATCACGGAATGCTTTTGCAGCAGCTAATGCAAGCCTGGCCGTGGGCAAGAATGCAGATGGTATTACCTCTATCAAAAAGGCCCTTGATTTTAGCTTTCAAGATGTGGAGGGGTTACTACGTTTGGTACGGCTTGCAGTGGAGGCCATTAATCGTTAA 4911 0.4339 MDRSWSWIWNKVSQCEDRDEIKGLGLGLGLSSRRKEMLEVELEEGEACSYQNREDYDATVDPDVALSYIDDKIQDVLGHFQKDFEGGVSAENLGAKFGGYGSFLPTYQRSPAWTHPRTPQKNHSQNSPRSPNNMHLESGQGDGVQCSTGNQLSRLGPGSATSSRLAAIKGLSLDDGTNHENSMSITNAEALNSKYESLNRKAAIISDQKTLKVRIKMGPDDLLTRKNAAIYSGLGLDVSPSSSLDDSPSESEGISRGPLDAPFESPTSILKIISTLPKLLSPLPDDLTELTEKEVRTRDCIPGPVRTDGPESSGMLLNESNIAKGDRKLLGGKKVKSLEGYESSMEVKGCSKKNTRNDVGGLSKKEQCEDVLTMEELVSKTMKLPLLSNSYSLGDDLVKNVDGPCNNSLKEANKGVVKEKTSSDQARKEQVDQASAEVNGFSERAKGGSGRKAVGDKVLLDDTIVAESNVSKVRTASSTECMEPPKKANQRDSLGEQDSATLPFVTEHPYPGGKKKSKGIHNTVIIEREQENMKSGSSLIPKTKRGSDDSYTSKNEIEDVKLRKGPGKAREAYREFFGELEDEDGIDSPETSYEDKLKESEGVERNAPETNLGAKETSAGKKVDKSLTTEVYPKAATNVNGNGVPAMLPHVEVEDNWVQCDRCHKWRLLPAGTNPDSLPEKWLCSMLNWLPDMNRCSFSEDETTKALFSLYQGHPLDAQSNLQNGSGSVMVGGNGATFQHPGQRHPSNDLHGVPGGKKKVAKEISNSSNKDGTSQFSHPIKKNIQSSVKSRSLNDVNKSPVVGEADASGEKHKNKPRMPEYNSDRGDTKNMKSRRDPDQDYSRPSKKSKTDMVHSADKDWIPEQNGTARKVSHSSNNALPTASAGKDRPRQKDHSSSSDSKFRKDRPPVSAEKRKSKGRDSLNEGSLDLENYGSIGSVKKRKLKEYQDAQAHSTGNPRLHESRISEQEFSDSRKEKKARSSRSEGKESSASKGSGRTDKKISHTKNQKLRQNPGSNHSHRSTDAMDSSKRDLGSVQVSVAATSSSSKVSGSHKTKASFQEVKGSPVESVSSSPLRILSTDKFSNREIMVKDEPRDTAAVDSPRRCLDGEDDGASDRSETARKDKSFTMTHRSDFQGKDVNHTSDTKPKSQTTSHFTNGGMDTMAHNVSHARKTGTESGLEENKQGCKSEPFAGKVKSSSSPSQLPDQSPLRETKHVDVKVKLEEKFGLKPDQNETVHTSKKDITGKSESRKKENHVKREHDVQEVSVDAISKKEPLHAHTKNQLADCDTERSSKRSLSERPDQEVLGKGKSQVETLNHCPRPVVGSQKGNGDMEVDPSKADEASKLQKKQFKKADHQNGTPQVGSRNPALNGHKSKEFEAPSPARKDSYSHAANNAVKEAKDLKHLADRLKNSGSTLESTSLYFQAALKFLHGASLLESGNNDNAKHSEMIQSKQMYSSTAKLCEFCAHEYEKSKDMASAALAYKCTEVAYMRVIYSSHTSASRDRHELQTALQMTPLGESPSSSASDVDNVNNSTAADKVVISKSVNSPQVAGNHVIAARSRPNFVRILNYAQDVNFAMEASRKSRNAFAAANASLAVGKNADGITSIKKALDFSFQDVEGLLRLVRLAVEAINR 1636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04695 1636 MobiDBLite consensus disorder prediction 805 858 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 1210 1307 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 766 797 - -
Trre13g04695 1636 PANTHER CW-TYPE ZINC FINGER 35 1636 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 1193 1209 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 580 622 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 1084 1144 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 719 733 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 1334 1355 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 410 451 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 1007 1021 - -
Trre13g04695 1636 Gene3D - 648 706 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 590 605 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 475 496 - -
Trre13g04695 1636 ProSiteProfiles Zinc finger CW-type profile. 651 704 IPR011124 GO:0008270
Trre13g04695 1636 MobiDBLite consensus disorder prediction 532 546 - -
Trre13g04695 1636 Coils Coil 1393 1413 - -
Trre13g04695 1636 Pfam CW-type Zinc Finger 656 702 IPR011124 GO:0008270
Trre13g04695 1636 MobiDBLite consensus disorder prediction 867 882 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 239 262 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 532 552 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 110 160 - -
Trre13g04695 1636 Coils Coil 188 208 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 719 1390 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 1028 1079 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 413 431 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 886 924 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 959 1005 - -
Trre13g04695 1636 MobiDBLite consensus disorder prediction 1145 1173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04695 Trre-Chr13 54006354 54014405 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04695 - - gmx:100806105 2187.15