Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04692 ATGCTTCATCAAAGGTCTATCGGTGTTCTTAATCGCTTTTTCTATCATAAACACCACTTCACTACCGTCCCCAAAACAAACTCTCGATTCCCTTTCAAATTCTCACGTTTTACAGCTCCCAAGGTTCTATCAATGGCTACATCTCATTCCAATCAACACAAGTTCACCAATCGACTTGCTTCAGAACAAAGCCCTTATCTTCTTCAACACGCTCATAACCCTGTTGATTGGTATCCATGGGGAGAAGAAGCTTTTGCTGAAGCACGTCGCAGAGATGCACCTATCTTCTTATCAATTGGGTACAGCACTTGTCATTGGTGTCATGTTATGGAGGTTGAGTCTTTTGAGGATGAGGGGATTGCCAAGTTGTTGAATGATTGGTTTGTTAGCATTAAGGTGGATCGAGAGGAACGACCCGATGTTGATAAGGTATACATGACGTATGTGCAGGCTTTGTATGGTGGAGGTGGTTGGCCCCTGACCGTGTTTCTTTCACCTGACTTGAAACCTTTAATGGGTGGAACTTACTTTCCCCCTGAAGATAAATATGGCCAACCTGGATTTAAGACTATACTCAGAAAGGTAAAAGAGGCTTGGGAAAGTAAAAGGGATATGCTAGTTAAGAGTGGAACATTTGCAATTGAACAGCTTTCTGAGGCATTGTCTAGTAGTTCAGATTCTGGTAAATTACCTGATGGTGTTTCTGATGATGCATTACGTCTATGCTCAGAGCAGCTCTCTGAGAACTATGATTCAGAATTCGGTGGCTTTGGATCTGCACCAAAATTTCCAAGACCGGTAGAGATAAACTTGATGCTTTACAACTCTAAAAAGTTGGAGGATACCGGAAAGTTAGATGGAGCTAACGAAAGTCAGAAAATGGTTTACTTTACCTTGCAATGCATGGCGAAAGGAGGCGTTCATGATCATGTTGGAGGGGGGTTTCACAGATATAGCGTGGATGAATGCTGGCATGTTCCACATTTTGAGAAGATGCTTTATGATCAAGGGCAGCTTGCTAATGTTTATTTAGATGCTTTTTCTATCACAAAAGATACATTCTATTCATCTATATCACGGGATATCCTGGACTATTTGAGGAGAGACATGATTGGTCCAGAAGGTGAAATTTTTTCAGCAGAGGATGCTGACAGTGCAGAGAATGAAGGGGATACACGAAAAAAGGAAGGAGCCTTTTACATATGGACCAGCAAAGAGGTTGAAGACTTACTTGGAGAGCATGCTGCTCTTTTTGAGGAGCACTATTACATAAAACAGATGGGTAACTGTGACCTATCTGAAATGAGTGATCCTCACAATGAATTCAAAGGACAGAATGTCCTGATTGAGAGAAAGGATACTTCAGAAATGGCATCAAAATATGGCATGCCAATTGAGACGTATCAAGAAATTCTTGGAGAATGCAGGCGTAAGTTGTTTGAAGTAAGGTTGAGGCGCCCAAAACCACATTTGGATGATAAGGTTATTGTATCTTGGAATGGGTTGGCAATCTCATCTTTTGCTAGGGCTTCTAAGATTCTAAAGGGTGAAGCTGAAGGAGTCAAGTTCAACTTTCCTGTTGTTGGTACTGAACCAGTGGAGTACTTGAGAATAGCAGGTAAAGCAGCATCCTTTATTAGGAATCAACTTTACAATGCAGAGACACACAGACTACAACATAGTTTCAGAAATTCTCCATCTAAAGCTCCTGGTTTCTTGGATGATTATGCCTTTATGATTTCTGGATTACTGGATCTCTATGAATTTGGGGGTGAAATCAACTGGCTTTTATGGGCCATTGAATTGCAGGAAACCCAGGATTCTTTGTTTCTTGATAGGGAAGGAGGTGGATATTTCAATAATACAGGAGAAGATTCTTCGGTTCTTCTCCGAGTGAAGGAAGACCATGATGGGGCAGAGCCCTCAGGGAACTCGGTCACCGCAATAAACCTTATAAGGTTGGCTTCCATGGTTTCTGGAAGTAAGGCTGATTATTATAAGCGAAATGCAGAACATCTATTGGCAGTTTTTGAGAAAAGATTGAAAGATACGGCTATGGCAGTGCCTTTAATGTGTTGTGCAGCAAACATGCTGCGCGTACCTTCCCGGAAGCAAGTGGTAGTTGTGGGTGAAAGGACTTCCGAAGAATTTGAAAGCATGCTTGCTGCAGCTCACGCAATATATGATCCCAACAGAACAGTTATTCATATAGATCCCAACAACAAAGAAGAGATTGAATTTTGGGAAGTAAATAACAGTAATATTGCTCTAATGGCAAAGAATAACAATGCAGCCAGCAAGGTTGTAGCTCTTGTATGTCAAAACTTCACTTGTAGCGCCCCCGTCACTGATCATTCATCACTTGGAGCTTTGCTCTCCCAAAAAGTGCGCGCCAGTTAA 2400 0.4171 MLHQRSIGVLNRFFYHKHHFTTVPKTNSRFPFKFSRFTAPKVLSMATSHSNQHKFTNRLASEQSPYLLQHAHNPVDWYPWGEEAFAEARRRDAPIFLSIGYSTCHWCHVMEVESFEDEGIAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLTVFLSPDLKPLMGGTYFPPEDKYGQPGFKTILRKVKEAWESKRDMLVKSGTFAIEQLSEALSSSSDSGKLPDGVSDDALRLCSEQLSENYDSEFGGFGSAPKFPRPVEINLMLYNSKKLEDTGKLDGANESQKMVYFTLQCMAKGGVHDHVGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYLDAFSITKDTFYSSISRDILDYLRRDMIGPEGEIFSAEDADSAENEGDTRKKEGAFYIWTSKEVEDLLGEHAALFEEHYYIKQMGNCDLSEMSDPHNEFKGQNVLIERKDTSEMASKYGMPIETYQEILGECRRKLFEVRLRRPKPHLDDKVIVSWNGLAISSFARASKILKGEAEGVKFNFPVVGTEPVEYLRIAGKAASFIRNQLYNAETHRLQHSFRNSPSKAPGFLDDYAFMISGLLDLYEFGGEINWLLWAIELQETQDSLFLDREGGGYFNNTGEDSSVLLRVKEDHDGAEPSGNSVTAINLIRLASMVSGSKADYYKRNAEHLLAVFEKRLKDTAMAVPLMCCAANMLRVPSRKQVVVVGERTSEEFESMLAAAHAIYDPNRTVIHIDPNNKEEIEFWEVNNSNIALMAKNNNAASKVVALVCQNFTCSAPVTDHSSLGALLSQKVRAS 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04692 799 Gene3D - 528 701 IPR012341 GO:0005975
Trre13g04692 799 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 46 795 IPR024705 -
Trre13g04692 799 SUPERFAMILY Six-hairpin glycosidases 245 639 IPR008928 GO:0005975
Trre13g04692 799 FunFam spermatogenesis-associated protein 20 527 704 - -
Trre13g04692 799 CDD SSP411 78 200 IPR004879 -
Trre13g04692 799 Pfam Protein of unknown function, DUF255 56 216 IPR004879 -
Trre13g04692 799 FunFam spermatogenesis-associated protein 20 54 226 - -
Trre13g04692 799 PIRSF UCP006402_thioredoxin 38 798 IPR024705 -
Trre13g04692 799 SUPERFAMILY Thioredoxin-like 55 198 IPR036249 -
Trre13g04692 799 Gene3D Glutaredoxin 55 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04692 Trre-Chr13 53979620 53985639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04692 - - gmx:100777751 1348.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04692 13 53979620 53985639 Trre13g04692 13 53979620 53985639 ECH