Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04679 ATGGGAAATCAATCCAAGGGGAGTGTTGATGGAGTTCAAAGTGATGTGAAGATGACAAGTATTTGGAGGAGTAGTGTTAATTATGATGTGTTTTTTAGGGTTCTTGCCTTTTTGCTTACCCTAACTGCTACTATCATTGTTGGTGTTGACAAAGAGACTAAGATTATTTCATATGCTGAATTGCAATTCAAAATTACTGCTAAGTGGGAATATATGTCTGCTATTGTGTTTTTCTTGGTGTCAAATGCTATAGGATGTTCATATGCAGCAATTTCTATGGTGATTTCAACAATTGCAAGAACCAGTGGAAACAAAACAACACTATTGATGATAACAATATTAGACCTTATCATAATGGCATTACTCTTCTCAGCCAATGGAGCAGGTGCTGCAGTGGGAGTGTTAGGACAGAAAGGAAACTCACATGTGCAATGGATGAAAGTTTGCAATGTATTTGATGCCTATTGTCGTCACATGACTGTTGCTTTGGTACTCTCCATCATTGGTTCCTCTGTCTTCCTTTTGATTGTGGTTCAATCTGTTTTCAAACTTCATTATTATAGATCAAATTAG 573 0.3665 MGNQSKGSVDGVQSDVKMTSIWRSSVNYDVFFRVLAFLLTLTATIIVGVDKETKIISYAELQFKITAKWEYMSAIVFFLVSNAIGCSYAAISMVISTIARTSGNKTTLLMITILDLIIMALLFSANGAGAAVGVLGQKGNSHVQWMKVCNVFDAYCRHMTVALVLSIIGSSVFLLIVVQSVFKLHYYRSN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04679 190 PANTHER CASP-LIKE PROTEIN 1U1 22 185 IPR044173 -
Trre13g04679 190 NCBIfam plant integral membrane protein TIGR01569 31 183 IPR006459 -
Trre13g04679 190 Pfam Casparian strip membrane protein domain 28 170 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04679 Trre-Chr13 53883360 53885308 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04679 - - psat:127125448 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04679 13 53883360 53885308 Trre13g04679 13 53883360 53885308 ECH