Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04668 ATGCTGGAAGCACCAGTTATCATCATCGGAGCTGGAACTTCCGGCATAGCCACCGCAGCTTGTTTAACAAAAAAATCCATACCATTCATTATTCTCGAAAGAGAAAACTGTTTTGCTTCTCTATGGCAAAAATACACCTACGATCGTGTTCATCTTCACTTAAGAAAACAACTTTGTGAATTACCACACTATCCTTTTCCACCTTCTTATCCTCACTATGTACCCAAAAAACAGTTCATAGATTATTTAGATAACTATGTCAAAAACTTCAACATCAATCCGTTGTATAACAGAGCTGTTGAGTTAGCAGAGTATTTTGATGATGATGACAAATGGAAGGTTAAAGCTAAGAATAAGGATTCTGGTGATGTTGAAGAATATTCTGGAAAGTTCTTGGTTGTTGCTAGTGGCGAAACCGCTGAACCTCGTGTACCCGAGGTTCAGGGGTTGGAAGGGTTTAAAGGGAAAGTGATTCATTCAACTGGATATAAAAATGGAAAAGAGTTTAAAGATCAACATGTTCTTGTTGTTGGTTCTGGTAATTCTGGTATGGAAATTGCTTTAGATTTGGCTAATTTTGGTGCTAAACCTTCCATCATCGTCAGAAGTCCGGTTCATTTTCTTTCTAAGGATATGATGTATTATGGTGGGGTTTTACTGAACTATCTGTCACCAAGTACAGTGGAGAAATTGGTGGTGATAGTTAGCAGGATTGTGTATGGAGATCTGAGCAAATATGGTATACCCTTTCCTAGTGAGGGACCTTTCACCATGAAGATGAAGTATGGAAAGTTTCCAGTAATTGATTTGGGAACTGTTAAGAAAATTAAATCTGGAGAGATACAGGTGTTGCCAGCTGAAATAGAGAGCATAAGAGGTAACCAAGTGTTATTCCGTGATGGAAAATCCTATCCATTTGACTCCATTATTTTTTGCACTGGCTTCAAGAGATCAACTCAAAAATGGCTTAAGGGAGGTGAAGATGTTTTGAATGAGGATGGTTTTGCAAAGGCTGGTATATGGAAGGGTAAGAATGGTTTTTACTGCGTTGGATTGTCAAGGAGGGGATTTTATGGAGCTAATCTTGATGCTCAAAATGTAGCAAATGATATTGCCTCGTTGCTTGGTTTGGTTCCTCAACATGAATGA 1149 0.3847 MLEAPVIIIGAGTSGIATAACLTKKSIPFIILERENCFASLWQKYTYDRVHLHLRKQLCELPHYPFPPSYPHYVPKKQFIDYLDNYVKNFNINPLYNRAVELAEYFDDDDKWKVKAKNKDSGDVEEYSGKFLVVASGETAEPRVPEVQGLEGFKGKVIHSTGYKNGKEFKDQHVLVVGSGNSGMEIALDLANFGAKPSIIVRSPVHFLSKDMMYYGGVLLNYLSPSTVEKLVVIVSRIVYGDLSKYGIPFPSEGPFTMKMKYGKFPVIDLGTVKKIKSGEIQVLPAEIESIRGNQVLFRDGKSYPFDSIIFCTGFKRSTQKWLKGGEDVLNEDGFAKAGIWKGKNGFYCVGLSRRGFYGANLDAQNVANDIASLLGLVPQHE 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04668 382 Pfam Flavin-binding monooxygenase-like 6 316 IPR020946 GO:0004499|GO:0050660|GO:0050661
Trre13g04668 382 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 5 373 - -
Trre13g04668 382 SUPERFAMILY FAD/NAD(P)-binding domain 171 336 IPR036188 -
Trre13g04668 382 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Trre13g04668 382 PRINTS FAD-dependent pyridine nucleotide reductase signature 173 191 - -
Trre13g04668 382 PIRSF FMO 3 324 IPR000960 GO:0050660|GO:0050661
Trre13g04668 382 Gene3D - 2 377 IPR036188 -
Trre13g04668 382 SUPERFAMILY FAD/NAD(P)-binding domain 6 209 IPR036188 -
Trre13g04668 382 PRINTS Pyridine nucleotide disulphide reductase class-II signature 5 27 - -
Trre13g04668 382 PRINTS Pyridine nucleotide disulphide reductase class-II signature 169 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04668 Trre-Chr13 53832032 53834621 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04668 K11816 - gmx:100777958 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04668 13 53832032 53834621 Trre13g04668 13 53832032 53834621 ECH