Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04644 ATGGAAGGTTCAGCAGTGTGGCAAGGTGCGGTTCTGGGTGGAATATTCTTCTGGCTTATTTCTTCTTCATATCTGAATTTAACTCTAAAGCTTAGATCTTTTCTTCAACCTTTCGTCATTCACTATGTTCAAACTGGAACCCCAATTCTTCTTCGGATCCAGAGTTACAGGGTTGGATTTCTTGATGCACTTTTTTCTGTGTTATCTTGTGTTGTTTCTGTACCATTTTACACTGCTTTTCTCCCTTTGTTATTCTGGAGTGGTCATGGTCAATTGGCTAGACAGATGACGTTGTTGATGGCGTTTTGTGATTATATAGGGAATTGTATAAAGGATGTGGTTTCAGCACCAAGACCTGCTTCTCCACCTGTGAGGAGAGTAACATCTACAAAAGATGAGGAAGAGAATGCTTTAGAATATGGACTTCCTTCTTCTCACACACTTAATACAGTTTGCTTATCAGGATACCTTTTGTACTATGTCCTGGCTCATACTCAAATTCAAGGTGCCTATATTTATTATTTTGGAGTTTCCCTTGCTTGCTTGTTCGTGGCCCTCGTTGGTTTGGGAAGAATTTATCTTGGTATGCACAGTTTGATTGATGTTGTTGCTGGGCTTTTTATTGGACTCGGAATCCTTGGACTTTGGCTTACAGTATATGAATGCATCGACAATTTTGTTGTCTCAGGACAAAATGTTACAACTTTTTGGGCTGCTTTGAGCTTCCTCCTGCTTTTTGCTTATCCAACTCCTGAACTACCAACTCCAAGTTTTGAGTTTCACACTGCTTTCAATGGTGTTGCTTTGGGAATTGTGTCTGGGGTACAGCAAACATACCATCAATTTCACCACAACAATGTTCCTCGTTTGTTCTCTTCAGAAATGACAATACCAGTATTCATGGGAAGAATGCTCTTGGGAATACCTACAATTCTAATTGTGAAATTCTGCAGTAAGACTCTTGCAAAATGGACTATTCCTGTGGTAGCAAACACATTAGGCATCCCAATAAAATCAACCACCTATATCCCCACATTGAATGGTGCTAAGACGGGAGAAAAGTCAAAGGCTTTCGATGTTGATACCGGAATTAGGTTTCTACAATATGCAGGTCTTGCGTGGTCTGTGGTCGACCTAGTGCCATCTATTTTTTCATACGTTAACCTGTGA 1170 0.4026 MEGSAVWQGAVLGGIFFWLISSSYLNLTLKLRSFLQPFVIHYVQTGTPILLRIQSYRVGFLDALFSVLSCVVSVPFYTAFLPLLFWSGHGQLARQMTLLMAFCDYIGNCIKDVVSAPRPASPPVRRVTSTKDEEENALEYGLPSSHTLNTVCLSGYLLYYVLAHTQIQGAYIYYFGVSLACLFVALVGLGRIYLGMHSLIDVVAGLFIGLGILGLWLTVYECIDNFVVSGQNVTTFWAALSFLLLFAYPTPELPTPSFEFHTAFNGVALGIVSGVQQTYHQFHHNNVPRLFSSEMTIPVFMGRMLLGIPTILIVKFCSKTLAKWTIPVVANTLGIPIKSTTYIPTLNGAKTGEKSKAFDVDTGIRFLQYAGLAWSVVDLVPSIFSYVNL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04644 389 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 18 336 - -
Trre13g04644 389 Pfam PAP2 superfamily 96 219 IPR000326 -
Trre13g04644 389 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 122 234 - -
Trre13g04644 389 CDD PAP2_SPPase1 60 217 - -
Trre13g04644 389 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 23 221 IPR036938 -
Trre13g04644 389 SMART acid_phosph_2 93 217 IPR000326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04644 Trre-Chr13 53670885 53674638 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04644 - - gmx:100778490 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04644 13 53670885 53674638 Trre13g04644 13 53670885 53674638 ECH