Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04618 ATGGAGAGTCAGGGATCAAGTGTTGAAATATTTGATAGATTCAAGTGGAAGATTGAGAAATTCTCTCAGTTGAATGTTGATAAGATATACTCAGAGTCTTTCATGCTTGGAGGCTATCCATGGAGGATTCTTCTGTTTCCAAAAGGAAACAAGAACAAAGGTGCAGTCAACCACTTATCAATGTACTTGGAGGCTGTGAAAACTGCTAATATGTCCGAGGAATGGAGCAGAGATGTCAAATTTAAGTTGCTTCTAATCAATCAGCTCGATTCCAACATGACAATAATCTCAAAAGAAACTAAGCATGAGTTTAATGCAAACAATGATATTAATTGGGGATATGTATCTTTCATGAAGTTAACTGATCTTCATGATGCTGAAAGGGGGTTTATTGTGAAAGATACTTGTATTGTTGGTGCAGAAGTTTTTGTTTCTAAGTCGTGCTGTGAGAAACAAGTAAATCAAGCAGATAACTTAACTGTTTCACCAGTTTCTATCGAACCTGCTAAAGAATTTGATGTAGAGTTGGGGTATGCTGCATTGGGGAGAGTTATTCATTTCTTCAAGACAAGAAAAGTGAAAGACATGAATGAACAAGTTTGTAAGGAACTTCAAGTTTTATGGGATGAACTTGAGAAATTTCAATTTGATGTCACTTGGCTAGAGCTGCATGTTCAATCTGCTTTGGGAATGAAACGTTATGTGGAGAAAGTTCTGGAGGCTGAAAAGTTGAAGCAGAATATGATAGCGCTAGAGCTTGAAATGGAGAGGCTAAAGGAGAAGTTAGTTGCAGCGGAGCTAAATATTGATGTAGAAAGAGACTTGTTGAATGCAAAAGGCTTCCATGAAATAGGTTTAGATTCTGATTTGGGATGTGTGATGTGGAGATCATAG 894 0.3725 MESQGSSVEIFDRFKWKIEKFSQLNVDKIYSESFMLGGYPWRILLFPKGNKNKGAVNHLSMYLEAVKTANMSEEWSRDVKFKLLLINQLDSNMTIISKETKHEFNANNDINWGYVSFMKLTDLHDAERGFIVKDTCIVGAEVFVSKSCCEKQVNQADNLTVSPVSIEPAKEFDVELGYAALGRVIHFFKTRKVKDMNEQVCKELQVLWDELEKFQFDVTWLELHVQSALGMKRYVEKVLEAEKLKQNMIALELEMERLKEKLVAAELNIDVERDLLNAKGFHEIGLDSDLGCVMWRS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04618 297 Coils Coil 234 275 - -
Trre13g04618 297 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 11 157 IPR008974 GO:0005515
Trre13g04618 297 ProSiteProfiles MATH/TRAF domain profile. 11 142 IPR002083 GO:0005515
Trre13g04618 297 CDD MATH 13 142 IPR002083 GO:0005515
Trre13g04618 297 SMART math_3 13 123 IPR002083 GO:0005515
Trre13g04618 297 SUPERFAMILY TRAF domain-like 14 147 - -
Trre13g04618 297 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 13 266 - -
Trre13g04618 297 Pfam MATH domain 18 144 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04618 Trre-Chr13 53548804 53549909 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04618 K11838 - cam:101489930 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04618 13 53548804 53549909 Trre13g04618 13 53548804 53549909 ECH