Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04606 ATGGATCACGATCCTAAATCCAACACAACCCCTTTGTTATCTTCCAAAAGAGCTTCAAAGCTTCAAACTTTAGGCAATATTATTGTCACTGTTGTTGGAACTGGTGTTTTGGGTTTGCCATTTGCTTTTCGGATTGCTGGTTGGGTTGCTGGCTCAATTGGTGTTGCCATCGTTGGCATTTCAACTTACTATTGCATGCTTTTACTTGTTTGGTGCAGAGATAAGTTGGCATTAGAAGAGCCATTAGTGGAATCAAGATCATATGGAGACCTGGGTTACAGATGCTTTGGAGCATTGGGTCGGTTTCTGACTGAATTTATACTTGTGGTAGCACAATGTGCAGGAGCTGTTGCGTATTTGGTATTTATTGGGCAAAACCTTGATTCTGTATTCCAAAGAAATGGACCACCACTTACCTCCTACATATTTATGCTTGTACCGGTTGAAATTGGATTGTCATGGATCGAGAGCTTATCGGCTTTAGCACCATTTAGCATTTTTGCTGATGTGTGCAATGTCCTAGCTATGGGAATTGTAATGAAGGAAGATGTACGACAGGCCATAAATGATGGATTTCCATTTAGAGAAAGAACGGCAATCACATCGAACATTGGGGGGTTGCCATTTGCAGCAGGCATGGCTGTTTTTTGTTTTGAGGGGTTTGGAATGACACTTGCCCTAGAGAATTCTATGCAGGATAAATCTAAATTCCCAAAGTTGCTGGCTCAGACTTTTAGTGGGATAACACTTGTATATATTCTTTTTGGGTTATGCGGTTACATAGCTTTTGGTGAAGAAACCAGAGACATTGTGACCCTTAATCTCCCTAGAACTTGGTCATCTTTTGCTGTACAGATAGGATTATGCCTGGGGCTTATGTTCACATTCCCAATCATGTTACACCCAATTAATGAAATTATAGAAGGAAAACTCAAAAGCATCCACAGAAACAACAATAGTGATTCAACAAGACTAGGCAAACTTACAATATACATCAGTCGCGCTATTGTTGTGGTTGTGCTAGCCGTCATAGCTTCATGTGTGCCAGAATTTGGTGTATTTGCGTCATTCGTGGGCAGTACCTTGTGTGCAATGCTCTCGTTTGTTTTGCCAGCCACATTTCATCTAAAACTATTTGGCTCTTCTCTATGCATCTGGCAAAAAATCCTTGATTATATTGTATTAATCACTGGATTATTTTTCGCTGTTTATGGAACTTACAACAAAATTGTTGGAGTTTGA 1242 0.401 MDHDPKSNTTPLLSSKRASKLQTLGNIIVTVVGTGVLGLPFAFRIAGWVAGSIGVAIVGISTYYCMLLLVWCRDKLALEEPLVESRSYGDLGYRCFGALGRFLTEFILVVAQCAGAVAYLVFIGQNLDSVFQRNGPPLTSYIFMLVPVEIGLSWIESLSALAPFSIFADVCNVLAMGIVMKEDVRQAINDGFPFRERTAITSNIGGLPFAAGMAVFCFEGFGMTLALENSMQDKSKFPKLLAQTFSGITLVYILFGLCGYIAFGEETRDIVTLNLPRTWSSFAVQIGLCLGLMFTFPIMLHPINEIIEGKLKSIHRNNNSDSTRLGKLTIYISRAIVVVVLAVIASCVPEFGVFASFVGSTLCAMLSFVLPATFHLKLFGSSLCIWQKILDYIVLITGLFFAVYGTYNKIVGV 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04606 413 PANTHER AMINO ACID TRANSPORTER 15 407 - -
Trre13g04606 413 Pfam Transmembrane amino acid transporter protein 17 410 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04606 Trre-Chr13 53482720 53485842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04606 3 413 Organic Solute Cotransporters AT3G11900 62.830 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04606 K14209 - gmx:100305659 635.18