Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04566 ATGATAGATATTGCTGTCAACTTCACAGATGGCATGTTTAAGGGAATCTACAATGGCAAACAATCTCACCTTGCTGATATTCCAACCGTTTTGAACAGAGCTTGGGCTGCTGGCGTTCACCGAATCATCGTAACTGGTGGATCCCTTCAGGAATCAAGGGAAGCTCTTGCAATTGCTGAAACAGATGGAAGACTCTTCTGTACTGTTGGTGTGCATCCAACACGTTGCAAGGAATTTGAGGAGAGTGGGGATCCAGAAAAGCATTTTCAGGATCTTTTGTCATTGGCTAAAGAGGGAATTCAGAAAGGAAAGGTGGTTGCAGTTGGAGAATGTGGATTAGACTATGACCGGCTTCATTTTTGCCCGGCAGAGATTCAAAAGAAGTACTTCGAGAAGCAGTTTGAATTGGCATACATCACAAAATTGCCTATGTTTTTGCACATGCGAGCAGCAGCTGCAGATTTCTGTGAAATAGTTCAGAAAAATAAGGACAGGTTCTCTGGTGGTGTCACTCATTCATTTACTGATAGTATGGATGATTGCAATAAGCTTCTCTCATTTGATAAAATGTACATTGGCATAAACGGGTGCTCTCTGAAGGCAACTGAGAACCTTGATGTTGTCAAGGGTATTCCTGTTGAGAGAATGATGATCGAGACAGACTCACCATACTGTGAAATCAAGAATACTCATGCCGGAATTGGTTTTGTTAAATCGAAATGGCCTTCAAAGAAGAAAGAAAAGTATGACCAAGAGTGCATTGTCAAAGGCCGCAATGAACCTTGTTTAGTTAGGCAAGTTCTTGAGGTGGTTGCTGGCTGTAAAGGCATCAATGATATAGATAACCTCAGTAGAACATTGTACCACAACACTTGCAGGGTGTTTTTCCCGCATGACTTGGATTCTGCAGCTGATGCTCTTCTAGCTGGTGATAATTCTTCATAA 945 0.4201 MIDIAVNFTDGMFKGIYNGKQSHLADIPTVLNRAWAAGVHRIIVTGGSLQESREALAIAETDGRLFCTVGVHPTRCKEFEESGDPEKHFQDLLSLAKEGIQKGKVVAVGECGLDYDRLHFCPAEIQKKYFEKQFELAYITKLPMFLHMRAAAADFCEIVQKNKDRFSGGVTHSFTDSMDDCNKLLSFDKMYIGINGCSLKATENLDVVKGIPVERMMIETDSPYCEIKNTHAGIGFVKSKWPSKKKEKYDQECIVKGRNEPCLVRQVLEVVAGCKGINDIDNLSRTLYHNTCRVFFPHDLDSAADALLAGDNSS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04566 314 FunFam Putative tatD related deoxyribonuclease 1 302 - -
Trre13g04566 314 PANTHER TATD FAMILY DEOXYRIBONUCLEASE 1 301 - -
Trre13g04566 314 Pfam TatD related DNase 24 295 IPR001130 GO:0016788
Trre13g04566 314 PIRSF DNase_TatD 1 299 IPR001130 GO:0016788
Trre13g04566 314 Gene3D - 1 302 - -
Trre13g04566 314 CDD TatD_DNAse 1 296 IPR001130 GO:0016788
Trre13g04566 314 SUPERFAMILY Metallo-dependent hydrolases 1 296 IPR032466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04566 Trre-Chr13 53135129 53138556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04566 K03424 - gmx:100814321 569.696