Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04556 ATGGAGCTCGAAGAACATGGAGTTCTTAGTGAATCGGCACGATCACGAAAGGATTTATGGGGAATGCATATGCCGTTGGTTTGTCCAGACGGAGCCGTTGTTGCTTATGTTTGGAAACGACAGCTTGCAGGTCAAGCTGGTGCTTCTGCCGTTGACAGGAGTAGGTTAGCTCTCAAAGCTTTTACTGATCAGAAAAGACGTTTTTTCCCGCATCTTGATGGTGGAATTGAAACTAATGAATCAGCTACGAAGAAACAATGTGGGTCTGAAGAAGTTGCATTTGAACCTAAGGAATTTGAACGACTGGACTGGTTAAAAAGTGCCTCAACACTCACCTCTTTAAATGAGAGTTTAGACGAACATAATTATCGTGGTTCTAATAAGCGAAGGCTAGGATCAATGGGAATGGTTGCTCCAGAGAAGGTTGCAGTGGTAGAATTGTTGTTCCCATCTATATTTAGAGCTGTCATATCCTTGCATCCTGCTGGTTCCACCGATCCTGATGCTGTAGCTTTCTTTTCTCCAGATGAGAGCGGAAGCTATGTACATGCAAGGGGATTTTCAGCTCATCACGTGTATAGGCATATTACGGACTATGCAATGATAGCTCTGCAGTATTTTCTTGGTAGCCAAGCTGGAACATCACTGTATTCTCTTTTGCACTGGATTTGCCGCTACCAGACTCTATTTTCAAGATCATGCAGAAAATGTTCAAAGCTGCTTTCCATGGATAAACAATCAAATTTATTGTTACCTCCAGTCCACCGACCCTACCGGAAGTTTTCATTTTCAAATATTTTGTCAACCATATCTTCAAAGGACCAGAATTCAGATAGTACGATGGCTTATCATATTGGCTGCCTCTCTGAGGAAGTATGA 879 0.4243 MELEEHGVLSESARSRKDLWGMHMPLVCPDGAVVAYVWKRQLAGQAGASAVDRSRLALKAFTDQKRRFFPHLDGGIETNESATKKQCGSEEVAFEPKEFERLDWLKSASTLTSLNESLDEHNYRGSNKRRLGSMGMVAPEKVAVVELLFPSIFRAVISLHPAGSTDPDAVAFFSPDESGSYVHARGFSAHHVYRHITDYAMIALQYFLGSQAGTSLYSLLHWICRYQTLFSRSCRKCSKLLSMDKQSNLLLPPVHRPYRKFSFSNILSTISSKDQNSDSTMAYHIGCLSEEV 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04556 292 Pfam Mediator complex subunit 27 173 287 IPR021627 GO:0016592
Trre13g04556 292 PANTHER 34 KDA TRANSCRIPTIONAL CO-ACTIVATOR-RELATED 2 93 IPR021627 GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04556 Trre-Chr13 52983149 52985508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04556 K15170 - gmx:100782776 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04556 13 52983149 52985508 Trre13g04556 13 52983149 52985508 ECH