Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04550 ATGGGCAGCGATAGCGATAGCGATTCATCAAACCATGGAAAATCAAATAAACATAAAAAAAATAAATCATCCACCTCTGATCATCAATCTGCACCACCGGCACCAGCCCCACCACAACCGCCGGTGGCTGCACCCCACATGATGTATTATCAATCGGGCCCCGGTTACCCGAACCCACCACCCTATCCTTACCCCCCACCACCACATGGATACCCCCCATACCCGCCACAGGGATACAATAACTACCCCGGTCCCGGTCATATACATGCACCATACTATAACGCCACGCCAAACTATCACACCGGTGACGGCGGTGCAAGTTTCATACGTGGTTTCATAATGTGTTCATGTTTTATATTCACAGGCTTCTTTGTTTCAACTCTTATCATAGCATTAATGTTACATCCTCAATTACCTGTTTACAAGGTTAATTCTTTATCCGTATCAAATTTCAACACAAGTACAACCTTAACAGGTGATTGGAACATTAGCATCACGGTTGAAAATCCAAATGATAGATTAAAAGGTTATTTTCGTGAGTTTAAGGTTGATATTGTGCATGATAACAATGAGATAGCAATGAGTACAGTGCCAAATTTTGAATTGGAAAAACAAGAACAAAAACAAATGGATGTTAGAGCATCATCTAGCAATGCTGTAATAGCTGTTTCGTATCAAAAATGGGATTTGGATAAAATGAGTAATGAAAGATTAAGTGGTTCTGTTATGTTTGGTGTGAGAATTGCTTCTATGACTGAATTTAGGTCTCCATCATTGACTACAAGAAATACAGGTATGTTGGCTAGTTGTATGGGGTTAAAGGTTGTGTTTCAAGGTCCTACTGGTACGGGTATGTTGGATAATAAGGGTATCCCTATCAATTGCACAATTTACATGTGA 900 0.4044 MGSDSDSDSSNHGKSNKHKKNKSSTSDHQSAPPAPAPPQPPVAAPHMMYYQSGPGYPNPPPYPYPPPPHGYPPYPPQGYNNYPGPGHIHAPYYNATPNYHTGDGGASFIRGFIMCSCFIFTGFFVSTLIIALMLHPQLPVYKVNSLSVSNFNTSTTLTGDWNISITVENPNDRLKGYFREFKVDIVHDNNEIAMSTVPNFELEKQEQKQMDVRASSSNAVIAVSYQKWDLDKMSNERLSGSVMFGVRIASMTEFRSPSLTTRNTGMLASCMGLKVVFQGPTGTGMLDNKGIPINCTIYM 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04550 299 SUPERFAMILY beta-sandwich domain of Sec23/24 32 99 - -
Trre13g04550 299 MobiDBLite consensus disorder prediction 1 49 - -
Trre13g04550 299 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 57 275 - -
Trre13g04550 299 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04550 Trre-Chr13 52926500 52927399 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04550 - - psat:127128953 328.561