Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04548 ATGTCGGTAAAAGAGTGTGACCACCACAAAGGAAAAAAACACAAACGTTTCAGAAAAATCTTCTGGGGAATCATAATCTTCCTCTTCATCGTCCTTGTCACAATTCTAATCATCTGGGCTGTTTTAAAACCTTCAAAACCATCTTTCATTCTTCAAGATGTCACTGTTTACGCTTTCAACGCCACAGTTCCAAATTTCTTAACCTCAAATTTCCAAGTCACAGTTTTATCTCGTAACCCAAACCACAAAATCGGTGTCTACTACGATCGTCTTGATGCTTACGTCACTTACCGGAGTCAACAAGTTACTTACCGGACCGCCATACCTCCGTCGTATCAAGGACACAAAGATGTTGACGTTTGGTCGCCGTTTGTTTACGGAACCAACGTTCCGGTAGCACCTTATAACTCTGTTAGTTTAAGTCAAGATCAAAGTAACGGTAACGTTCTTGTTGTCGTTAAACTTGACGGTAGAGTTAGATGGAAGGTTGGTGCTTTCATTTCTGGTCATTATCATATTTTTGTTCGTTGTCCTGCTTTCATTACGTTTGGTTCAAGGAGTAACGGAATTAGCGTCGGAGATAGCGGCGCCGTTAAGTATCAGTTAGTTCAACGGTGTACCGTTAATGTTTGA 633 0.4107 MSVKECDHHKGKKHKRFRKIFWGIIIFLFIVLVTILIIWAVLKPSKPSFILQDVTVYAFNATVPNFLTSNFQVTVLSRNPNHKIGVYYDRLDAYVTYRSQQVTYRTAIPPSYQGHKDVDVWSPFVYGTNVPVAPYNSVSLSQDQSNGNVLVVVKLDGRVRWKVGAFISGHYHIFVRCPAFITFGSRSNGISVGDSGAVKYQLVQRCTVNV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04548 210 Pfam Late embryogenesis abundant protein 74 177 IPR004864 -
Trre13g04548 210 PANTHER OS05G0367900 PROTEIN 18 197 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04548 Trre-Chr13 52907355 52907987 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04548 - - gmx:100795832 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04548 13 52907355 52907987 Trre13g04548 13 52907355 52907987 ECH