Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04533 ATGGCGTGGTGCTCAGCTCCATCAGCTTCTCTCTTATCTTCAAACCCTAACATTCTCTTCTCTCCCAAATTATCTTCTCCACCTCTTTCTTCTCTCTCTATCCCCAATGCATCCAATTCTCTCCCCAAACTAACCACCACTTCCCTCCCTCTCTCTCTTTCACTCAACCGCTCCTCTCCTTCTCGCCGCAGTTTCCTCGTCAGAGCTTCTAGTGGACTACCGTTAGTTGGAAACACAGCGCCGGATTTTGAAGCCGAGGCTGTTTTCGATCAGGAGTTTATCAAGGTTAAACTATCTGAATATATTGGGAAGAAATATGTTATTCTCTTTTTCTACCCATTGGACTTCACATTTGTTTGTCCCACAGAAATCACTGCTTTCAGTGACCGCCATGCAGAATTTGAGGAACTTAATACAGAGATATTGGGTGTTTCCGTTGACAGTGTGTTCTCGCACCTTGCCTGGGTTCAAACAGATAGAAAGTCAGGTGGTCTTGGCGACTTGAACTATCCTTTGGTTTCTGATATCACAAAATCCATATCAAAATCTTATGGTGTTCTCATTCCTGATCAAGGGATAGCTTTGAGAGGGTTGTTCATTATTGACAAGGAAGGGGTTATCCAGCATTCTACCATCAACAACCTTGGAATTGGTAGAAGTGTTGATGAGACAAAGAGAACACTCCAGGCTTTGCAGTACGTGCAGGAGAACCCGGACGAAGTTTGCCCTGCTGGGTGGAAGCCTGGTGAGAAGTCCATGAAACCAGACCCTAAACTCAGCAAAGAGTACTTTGCTGCTGTGTAG 804 0.4502 MAWCSAPSASLLSSNPNILFSPKLSSPPLSSLSIPNASNSLPKLTTTSLPLSLSLNRSSPSRRSFLVRASSGLPLVGNTAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFEELNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFAAV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04533 267 Pfam AhpC/TSA family 76 209 IPR000866 GO:0016209|GO:0016491
Trre13g04533 267 FunFam 2-Cys peroxiredoxin BAS1, chloroplastic 68 267 - -
Trre13g04533 267 SUPERFAMILY Thioredoxin-like 74 265 IPR036249 -
Trre13g04533 267 CDD PRX_Typ2cys 76 249 - -
Trre13g04533 267 PANTHER THIOREDOXIN PEROXIDASE 70 266 - -
Trre13g04533 267 ProSiteProfiles Thioredoxin domain profile. 74 233 IPR013766 -
Trre13g04533 267 Gene3D Glutaredoxin 69 267 - -
Trre13g04533 267 Pfam C-terminal domain of 1-Cys peroxiredoxin 230 264 IPR019479 GO:0051920
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04533 Trre-Chr13 52834506 52836891 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04533 K03386 - cave:132192196 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04533 13 52834506 52836891 Trre13g04533 13 52834506 52836891 ECH