Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04524 ATGTGTAACCGCAAAACCCTATCGGAATCAATTCCCCTTTCTCCACGATCTAATGTACCTGTTCTAGCCAGATCAGTGTGGAATTCCAATCTCGAATCCGAATTCGTTTTGATTCGTTCCCTTATCGATTCATATCCTCTCATTTCAATGGATACAGAATTTCCCGGCGTTATTGTTCGTGCTGATTCCGGTGACCCGTCGTTCAAGCACCGTGGTAATCTTCCAACCCTAGGTACTAAATCTTACATTTGGGAATTTAACTTCAAAGACTTTGATGTTGCGCGTGATGATCATGCTGTTGATTCTGTTGAGATGTTGAGGCGTCAAGGTATTGATTTTGAGAAGAATCGTGAGTTTGGGATTGACTCGGTTCGTTTTGCTGAGTTGATGATGGCTTCTGGTCTTGTATGTGATGATTCTGTGAGCTGGGTTACTTTTCATAGTGCTTATGATTTTGGTTATCTTGTGAAGTTGCTGACGCAGCGTGCATTACCGGAGGATTTGGAGGAATTTCTCCTTATTGTGAAGGTGTTTTTTGGTGATAAGGTTTTTGATGTGAAGCATTTGATGAGGTTCTGCTCGAACTTGCACGGAGGGTTGGATAGGGTTTGTCAGTCATTGAAGGTGGAACGGATTATAGGGAAGAGTCATCAGGCTGGTTCTGATAGTTTGCTTACTTTGCACGCTTTTCAGAATATCCGAGAGCTTTACTTTGGGAAAGCAGACGGGTTTGTCAAATATGCTGGTGTATTGTATGGATTAGAGGTTTGCTGA 774 0.4251 MCNRKTLSESIPLSPRSNVPVLARSVWNSNLESEFVLIRSLIDSYPLISMDTEFPGVIVRADSGDPSFKHRGNLPTLGTKSYIWEFNFKDFDVARDDHAVDSVEMLRRQGIDFEKNREFGIDSVRFAELMMASGLVCDDSVSWVTFHSAYDFGYLVKLLTQRALPEDLEEFLLIVKVFFGDKVFDVKHLMRFCSNLHGGLDRVCQSLKVERIIGKSHQAGSDSLLTLHAFQNIRELYFGKADGFVKYAGVLYGLEVC 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04524 257 Gene3D - 67 256 IPR036397 GO:0003676
Trre13g04524 257 Gene3D - 11 66 IPR036397 GO:0003676
Trre13g04524 257 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 24 255 IPR039637 GO:0004535|GO:0030014
Trre13g04524 257 SUPERFAMILY Ribonuclease H-like 18 255 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04524 Trre-Chr13 52770085 52770942 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04524 K12581 - gmx:100790027 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04524 13 52770085 52770942 Trre13g04524 13 52770085 52770942 ECH