Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04516 ATGGATAATGCACTTCCTGGAAAAATCAGAAAACGAGGATGTTCATCATCAGCATCATCATCATCCTCAGTAATGAATCAAAACTACAGATTCAAACGTGCTATTCTAGTTGGTAAAAGGTGTGGATCCACTACACCTGTACCTACGTGGAAGCTTTTAACCTCACGATCTCCATCGTCTGCGATGCGAATACTTGAATCACCGAAATATCCACCGTCACAGTCCGGTAGTAAACCGAAACAAGTTCCGGTGTCGGCGAGGAAACTGGCGGCGACGTTATGGGAAATGAATGAGATTCCTTCGCCTAGTGTTAAAGAAATGCGTGATGATCATGTTAAGTTGAAAAAAGAGCTTAAATCAAAAGATAGGGTTGCGATTGGAAATTCTAGGTCTATTTGTTCTGCTTCTTTGCCTCCTCATTTGTCTGATCCATCACATAGTCCTTCATCAGAGAGAATGGATCGATCTGGAATTGGTAATCGCCATAGAAGGACACCGTCGAATTCTCACAGGTCGAAGATCGCAGAACACCGTGTTGGAGGACCTTTGGATTCTTTTAGCAATGCCAGTGTTATGGAGGTTGAAACCAGGTCTCGAGCACAGACCCCTGCTTCATCTACAGTGGGAGTTAAACCGCGTTTGAAAGATGTCAGTAATGCTTTAATAACATCGAAAGAGCTACTTAAAATTATAAACCGCATGTGGGGTCATGAAGTCCGTCCTTCTTCTAGTATGTCCCTTATCTCAGCTCTACATACTGAGCTCGAGAGAGCTCGACTACAGGTCAATCAGCTTATCCAGGAACAACGCTCAGATCAGAATGAGATAAATTATTTGATGAAGTGTTTTTCTGAAGAAAAGGCTACTTGGAAAATCAAGGAGCGAGAAATTGTTGAGGCTGCGATTGAATCTGTTGCAGGAGAACTTGATGTAGAGCGGAAGCTCAGGAGGCGTCTGGAAAGTTTGAATAAGAAGCTTGGGAGAGAACTGGCTGAGACCAAAGCATCCCTTCTTAAGGTGGTGAAAGAACTTGAAACTGAGAAGAGAGCAAGAGAAATTATTGAGAAAGTATGTGATGAGTTAGCAAGAGATGTCGACGACGATAAATCTGAGATAGAGAAACAAAGGAGAGTGTCAACAAAAGCTTGTCAAGACATAGAGAAAGAAAAGGAAATGATGCAGTTAACCGAATATTTACGCGAGGAGAGAGCTCAAAAGAAACTCGCCGAGGCAAAATATCAGCACGAGGAAAATAATGCGGCTGTTGATATGCTCAGGAATCAGCTTGAAACTTTTCTAGGAAGCAAACCAGTTAGAGAAAAAGGACGTAGTTCCACCCACTTGAACGATGAAGAAATCGCTGCATATCTGGGAAGAAGCAGATTAGCCTCCCATCATACCGAAGATAAAGAAGACGATGAAGGAGAGGTTGACAATGGAGTAGAGTGCGAAGAGGAATCTGGTGAAAGCGACATGCATTCTATAGAGTTAAATATGGACAATAACAACAAAAGCTATAAGTGGACCTACCCTTCTGAAAGCCGATTTGATACAAGAAAATATCCAATCCAGGAAGAAACAAAAGGTAGGACTATCTCTGGGAGAGCTTCAAGGATAAGCACATCTCTGCAAAGGAGTATATCAGATGGAGTGGAATGGGGCAACCAAGGTGACGAGAAGCTCCAAAATTCAGGAGATGGAATAGATTGGGAAAGCTTTTATGAATTGGAGCAGCAAGAAGCTCAAGGAAAAAGTTACGCCGATGAAATACAAAGCTATAAATCAGTGAAAGGTTTAAAGGATCAGATATTGGCTGGTGCCAGGCTTGGATCTTCTAAAGGCTATGCAAGTCCAACTAGACAATTTTCCCAACCTTCACCGTCACGAGATCCTACAAATACCTTCCAAGAGAGACATGCTACAATGCAGAGAAATGGTCAAAAATCAAGGCTAGGGGAAGCCAGGGGTGAGGCTCAGAATGTAAGAAAGTCCAAAAGGTGA 2001 0.4258 MDNALPGKIRKRGCSSSASSSSSVMNQNYRFKRAILVGKRCGSTTPVPTWKLLTSRSPSSAMRILESPKYPPSQSGSKPKQVPVSARKLAATLWEMNEIPSPSVKEMRDDHVKLKKELKSKDRVAIGNSRSICSASLPPHLSDPSHSPSSERMDRSGIGNRHRRTPSNSHRSKIAEHRVGGPLDSFSNASVMEVETRSRAQTPASSTVGVKPRLKDVSNALITSKELLKIINRMWGHEVRPSSSMSLISALHTELERARLQVNQLIQEQRSDQNEINYLMKCFSEEKATWKIKEREIVEAAIESVAGELDVERKLRRRLESLNKKLGRELAETKASLLKVVKELETEKRAREIIEKVCDELARDVDDDKSEIEKQRRVSTKACQDIEKEKEMMQLTEYLREERAQKKLAEAKYQHEENNAAVDMLRNQLETFLGSKPVREKGRSSTHLNDEEIAAYLGRSRLASHHTEDKEDDEGEVDNGVECEEESGESDMHSIELNMDNNNKSYKWTYPSESRFDTRKYPIQEETKGRTISGRASRISTSLQRSISDGVEWGNQGDEKLQNSGDGIDWESFYELEQQEAQGKSYADEIQSYKSVKGLKDQILAGARLGSSKGYASPTRQFSQPSPSRDPTNTFQERHATMQRNGQKSRLGEARGEAQNVRKSKR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04516 666 Coils Coil 392 419 - -
Trre13g04516 666 PANTHER GB|AAF24581.1 27 662 IPR043424 -
Trre13g04516 666 Coils Coil 312 336 - -
Trre13g04516 666 MobiDBLite consensus disorder prediction 463 498 - -
Trre13g04516 666 MobiDBLite consensus disorder prediction 127 146 - -
Trre13g04516 666 MobiDBLite consensus disorder prediction 147 161 - -
Trre13g04516 666 MobiDBLite consensus disorder prediction 614 648 - -
Trre13g04516 666 MobiDBLite consensus disorder prediction 1 23 - -
Trre13g04516 666 Coils Coil 248 275 - -
Trre13g04516 666 MobiDBLite consensus disorder prediction 64 83 - -
Trre13g04516 666 MobiDBLite consensus disorder prediction 609 666 - -
Trre13g04516 666 MobiDBLite consensus disorder prediction 123 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04516 Trre-Chr13 52663419 52666928 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04516 - - gmx:100787903 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04516 13 52663419 52666928 Trre13g04516 13 52663419 52666928 ECH