Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04515 ATGGCAATTCTCTTCCACTTAGTAATTATACTATTTTCATTATTTTCTCTCTTGTTGTGCTTTACCTTTACTTCTGCTCATATTGTACCCAAATTTCCTTCTTCAGTGGTTAGTCCAGAGTTACAACAAAGTTCTGTTTCTGTCCCAAATGGACTTTATAGGACAAAATTCTTTACACAAATACTTGATCATTTCAATTATAACCCTCAAAGCTATGAAACTTTTCAACAAAGATATCTCATCAATGATACTTATTGGGGTGCACCTTATTTCAATGCCCTTTTGGTTTTTATTGAGCATAGATACTATGGAAAATCAATACCATTTGGAGGAAATAATGAGGTTGCAAATAGGAATAGTAGCACACTTGGATATATGAGCTCCACACAAGCTTTGGCTGATTATGCTACTCTCATAATTGATCTTAAGAAGAATTTGTCAGCAATTGATTCCCCTGTTGCTGTGTTTGGAGGATCCTATGGAGGAATGCTAGCTGCATGGTTTAGGTTGAAGTATCCACACGTTGCCATTGGAGCTTTGGCATCCTCTGCTCCAATCCTTCAATTTTTAGATTTGGTTTCACCATATACATTCACCAACATTGTAACTCAAGACTACAAGAGTGAGAGTGAGAATTGTTACAAAGTGATCAAAGGGTCTTGGAAACAAATAGAAGACATAGCCAATGCACCAGGAGGAATAGAACAGCTACATAAATCATTCAAAATATGCAAGAATAGTACAATTACTGCAGATGCTCTCAAAGGTTTGCTTGAAACAGCTTTGATGTACACAGCCATGACAGATTATCCAACACCAACAAATTTCCTAACTCCCTTACCAGCTTATCCAGTTAGAAAGATGTGTGAGGCGATCGATAGCATATCCATGGCCGGGAACGAATCGCTCACCAAGATGTATGCTGTAGCAAATATTTTCTACAACTATACCGGAACTCTCACATGTTTTGATATTGGTAATGATTCGGATGATTCTGTTGATCAGGGTGGATGGGATTGGCAGTCATGTACGGAAATGATCATGCCCCTAGGTGGGAACAATGAGGAGAGCATTTTTCCAGCTAACAAATGGGATTTGGAAGACACAATCTCTTACTGCAAACATGAATATCATATAGTGCCAAGACCCCATTGGATTACTACTGAATTTGGTGGTCAAGATATTGGCAGAGTTTTGAAAAGGTTTGCGAGTAACATTATCTTTTTCAATGGTTTAAGAGACCCTTGGAGTGGTGGAGGGGTATTGAAAAATATATCAAAAACTTTAATTGCTATAGTTGCAAAAGAAGGAGCTCATCATGTAGACCTGAGGTTCTCAACAAAGGGAGATCCAAAGTGGCTAAAAAATGTAAGGAAACAAGAAGTAAAGATCATAGAAAGTTGGATATCCCAATATTATCAAGACCTATTACTACAAGGATGA 1443 0.3763 MAILFHLVIILFSLFSLLLCFTFTSAHIVPKFPSSVVSPELQQSSVSVPNGLYRTKFFTQILDHFNYNPQSYETFQQRYLINDTYWGAPYFNALLVFIEHRYYGKSIPFGGNNEVANRNSSTLGYMSSTQALADYATLIIDLKKNLSAIDSPVAVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILQFLDLVSPYTFTNIVTQDYKSESENCYKVIKGSWKQIEDIANAPGGIEQLHKSFKICKNSTITADALKGLLETALMYTAMTDYPTPTNFLTPLPAYPVRKMCEAIDSISMAGNESLTKMYAVANIFYNYTGTLTCFDIGNDSDDSVDQGGWDWQSCTEMIMPLGGNNEESIFPANKWDLEDTISYCKHEYHIVPRPHWITTEFGGQDIGRVLKRFASNIIFFNGLRDPWSGGGVLKNISKTLIAIVAKEGAHHVDLRFSTKGDPKWLKNVRKQEVKIIESWISQYYQDLLLQG 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04515 480 SUPERFAMILY alpha/beta-Hydrolases 76 443 IPR029058 -
Trre13g04515 480 Pfam Serine carboxypeptidase S28 88 460 IPR008758 GO:0006508|GO:0008236
Trre13g04515 480 Gene3D Serine carboxypeptidase S28, SKS domain 194 363 IPR042269 -
Trre13g04515 480 FunFam Dipeptidyl peptidase 7 194 337 - -
Trre13g04515 480 Gene3D alpha/beta hydrolase 89 469 IPR029058 -
Trre13g04515 480 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 88 475 - -
Trre13g04515 480 Gene3D alpha/beta hydrolase 57 88 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04515 Trre-Chr13 52650558 52654841 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04515 K01285 - gmx:100787376 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04515 13 52650558 52654841 Trre13g04515 13 52650558 52654841 ECH