Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04505 ATGTCTCAGTCTAAGAAATTGACGCCGAATCTGGATCAGCACAGCACGAAGTTACTCAATCTCACTGTGCTCCAACGCATGGATCCATTCATCGATGAGATTCTCTTCACCGCTGCACACGTTTCGTTCTATGACTTCAACATCGAAACCAATCAGTGGAGTCGCAAAGATGTTGAAGGATCTCTCTTTGTTGTTAAGAGGAATGCTCAACCGCGGTTTCAATTTATCGTAATGAATCGGAGAAATACAGATAATCTAGTGGAAAATCTATTGGATTTTGAGTATGAACTTAAAAAGCCATACTTGTTATATCGGAATGCATCCCAAGAAGTTAATGGTATATGGTTTTACAATCCAGAAGAGTGTGAAGAAGTTGCAAATCTCTTTAATAGGATTCTTAGTGCATACCCAAAGGCACTTCCAAATACAACAATGCCTTCTGACAAAAGTGAGTTTGAGGAACTTGGCCGAGTGTCAACAATAACGGAAAGCCCTATAGAGCCATCTTCAGCTGCTGCTGCTGCTACAAATGATGCTACTGAAGATTCCATTTTCACAAATTTCTTCAACACATGTAAGGTTACTGGACCTTATGCTTCAAATGTAGAAAGTTTTCACCAGCCCTACCAGTCTGCAAGTGTCACTTCTACTGTTCCCGGTGGTTTTTTGTCTCCCATACCTTCTATTCAAATGCCATCTGCCTCTATTGAAAGAATCAATAGTGCCAATCAGATCACTAATCTTATTAAGCCTTCTACTTTTCTTGCACCCAACTCTTTATTACCATTAATTCCACCTATTTCTTCACCTGCGCCACCTAGTACGGCTGCTCATCATTCACAAAATCTGCCACGCCAATATGGCACTCCACTGCTTCAACCCTTCCCACCTCCTAATCCTCCTTCTTCTCTTACCCCTATTTCTAGCTCCATGCCAAATAGACCGGTTATCAGCAGGGATAAAGTCCGTGATGCACTTATATCATTGGTTCAGGATGATAAATTTATAGACATGATGTTCCAAACATTGTTCAAGATGCATAATTCATGA 1050 0.4076 MSQSKKLTPNLDQHSTKLLNLTVLQRMDPFIDEILFTAAHVSFYDFNIETNQWSRKDVEGSLFVVKRNAQPRFQFIVMNRRNTDNLVENLLDFEYELKKPYLLYRNASQEVNGIWFYNPEECEEVANLFNRILSAYPKALPNTTMPSDKSEFEELGRVSTITESPIEPSSAAAAATNDATEDSIFTNFFNTCKVTGPYASNVESFHQPYQSASVTSTVPGGFLSPIPSIQMPSASIERINSANQITNLIKPSTFLAPNSLLPLIPPISSPAPPSTAAHHSQNLPRQYGTPLLQPFPPPNPPSSLTPISSSMPNRPVISRDKVRDALISLVQDDKFIDMMFQTLFKMHNS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04505 349 FunFam mRNA-decapping enzyme-like protein 9 135 - -
Trre13g04505 349 SUPERFAMILY PH domain-like 19 138 - -
Trre13g04505 349 MobiDBLite consensus disorder prediction 290 305 - -
Trre13g04505 349 CDD EVH1-like_Dcp1 19 133 - -
Trre13g04505 349 Pfam Dcp1-like decapping family 17 130 IPR010334 GO:0000290|GO:0008047|GO:0043085
Trre13g04505 349 PANTHER TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 10 347 IPR010334 GO:0000290|GO:0008047|GO:0043085
Trre13g04505 349 Gene3D - 7 135 IPR011993 -
Trre13g04505 349 MobiDBLite consensus disorder prediction 273 288 - -
Trre13g04505 349 MobiDBLite consensus disorder prediction 266 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04505 Trre-Chr13 52578422 52582089 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04505 K12611 - gmx:100786833 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04505 13 52578422 52582089 Trre13g04505 13 52578422 52582089 ECH