Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04504 ATGTCTGAGATGTTGGACGGTGCAATTCGACGAGTCGTTGTTATCGGAAACGGCTTCGCCGGCGCTGAGAATCAGAGCATTGGATTGGTTCGTGCTCTCGGTCTTTCCAATCGCCTTTCCTTATACCGCGTGACGAGGCCGCGAGGAGGAATTAATAGATGGTTTAAATGGCTTCCAGTTTCAATACATAAAAAATTAGACTCAGTTGTTAGAAAAATTTGTGGCAATTCACGATTTCAATCACTGACTCACAACATTGGTATATCTAATGTTTTAGAAGCTGATGCTCACAGCATTGCGATAATGGCGCGTGAAACGTTCTATAAGGATGGTCCTTTGTTGGTTATTGCGTCTGGACGAGACACCATTTCTGTTGCCACTTCCATTAAATGGTTAGCTTCGGAAAATGTTTTTCTTGTTCAGATACAACATCCAAGATTCCTCCTGAATAGGTTTGATCTTGTGATTACTCCTCGCCATGACTACTATCCCCTGACTCCTCATGCCCAGCGGCAATTACCTTGGTTTCTTCGGAAGTGGGTCACTCCATGGGAACCTCCTGGCCGCAACGTGGTCCTTACCATGGGAGCACTTCATCAAGCTGATTCGGCTGCTCTTAGGGCTGCTGCTTCTGCTTGGCATAATGAGTTAGCTACTCTGCCAAAGCCTTTACTTGTGGTTAACATCGGGGGACCCACAGGCAATTGTCCCTATGGTGTAGATCTTGCAAATAATTTAGTGGTTATGCTTCAGAATGTTCTATGCAGCTGTGGGACAATCAGAATATCTTTCTCTAGAAGAACTCCTGAGAAGATCTCCAAAATTTTGATCAAAGAATTTTCCACAAATCCTAAGGTCCAAATATGGGATGGCGAAGGTCCAAATCCACATATGGGACATCTAGCATGGGCCGATGCCTTTGTTATCACAGCTGATTCAGTTAGTATGTTGAGTGAGGCCTGTAGTACTGGGAAGCCTGTGTATGTAATCGGAGCAGAATTGTGTACATGGAAGTTTGCTGACTTCCAAAACTCTTTGCAGAAGCAAGGAGTTGCTCGACCATTCACTGGGATGGAAAATATAGCTGAAAGCTGGTTTTATCCTCCACTGAATGACACTGCAGAAGCTGCTAGTCAAGTGATTGCGGCACTTGCTCAACGGGGATGGACTATTCGTGCATAA 1182 0.4484 MSEMLDGAIRRVVVIGNGFAGAENQSIGLVRALGLSNRLSLYRVTRPRGGINRWFKWLPVSIHKKLDSVVRKICGNSRFQSLTHNIGISNVLEADAHSIAIMARETFYKDGPLLVIASGRDTISVATSIKWLASENVFLVQIQHPRFLLNRFDLVITPRHDYYPLTPHAQRQLPWFLRKWVTPWEPPGRNVVLTMGALHQADSAALRAAASAWHNELATLPKPLLVVNIGGPTGNCPYGVDLANNLVVMLQNVLCSCGTIRISFSRRTPEKISKILIKEFSTNPKVQIWDGEGPNPHMGHLAWADAFVITADSVSMLSEACSTGKPVYVIGAELCTWKFADFQNSLQKQGVARPFTGMENIAESWFYPPLNDTAEAASQVIAALAQRGWTIRA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04504 393 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 102 331 - -
Trre13g04504 393 PANTHER OS02G0535700 PROTEIN 8 392 IPR009367 -
Trre13g04504 393 Pfam Mitochondrial fission ELM1 20 384 IPR009367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04504 Trre-Chr13 52573322 52577181 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04504 - - gmx:100801126 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04504 13 52573322 52577181 Trre13g04504 13 52573322 52577181 ECH